Initial import of the phpmanual.htmlparser plugin
[phpeclipse.git] / net.sourceforge.phpeclipse / src / net / sourceforge / phpeclipse / PHPeclipsePlugin.java
index b0b2811..34980fc 100644 (file)
@@ -5,20 +5,20 @@
  which accompanies this distribution, and is available at
  http://www.eclipse.org/legal/cpl-v10.html
 
- Contributors:
- IBM Corporation - Initial implementation
- Klaus Hartlage - www.eclipseproject.de
  **********************************************************************/
 package net.sourceforge.phpeclipse;
 
 import java.io.File;
 import java.io.IOException;
+import java.io.InputStream;
 import java.util.ArrayList;
 import java.util.Collection;
+import java.util.Enumeration;
 import java.util.HashMap;
 import java.util.HashSet;
 import java.util.Iterator;
 import java.util.List;
+import java.util.PropertyResourceBundle;
 import java.util.Set;
 
 import net.sourceforge.phpdt.core.IBuffer;
@@ -27,10 +27,9 @@ import net.sourceforge.phpdt.core.ICompilationUnit;
 import net.sourceforge.phpdt.core.IJavaElement;
 import net.sourceforge.phpdt.core.JavaCore;
 import net.sourceforge.phpdt.core.WorkingCopyOwner;
-import net.sourceforge.phpdt.externaltools.internal.model.ColorManager;
-import net.sourceforge.phpdt.externaltools.internal.model.ExternalToolsPlugin;
 import net.sourceforge.phpdt.internal.core.BatchOperation;
 import net.sourceforge.phpdt.internal.core.JavaModelManager;
+import net.sourceforge.phpdt.internal.core.util.Util;
 import net.sourceforge.phpdt.internal.corext.template.php.CodeTemplateContextType;
 import net.sourceforge.phpdt.internal.corext.template.php.HTMLContextType;
 import net.sourceforge.phpdt.internal.corext.template.php.JavaContextType;
@@ -55,6 +54,7 @@ import net.sourceforge.phpeclipse.builder.FileStorage;
 import net.sourceforge.phpeclipse.builder.IdentifierIndexManager;
 import net.sourceforge.phpeclipse.phpeditor.CustomBufferFactory;
 import net.sourceforge.phpeclipse.phpeditor.DocumentAdapter;
+import net.sourceforge.phpeclipse.phpeditor.ICompilationUnitDocumentProvider;
 import net.sourceforge.phpeclipse.phpeditor.PHPDocumentProvider;
 import net.sourceforge.phpeclipse.phpeditor.PHPSyntaxRdr;
 import net.sourceforge.phpeclipse.phpeditor.WorkingCopyManager;
@@ -68,17 +68,18 @@ import org.eclipse.core.resources.ISavedState;
 import org.eclipse.core.resources.IWorkspace;
 import org.eclipse.core.resources.IWorkspaceRunnable;
 import org.eclipse.core.resources.ResourcesPlugin;
+import org.eclipse.core.resources.WorkspaceJob;
 import org.eclipse.core.runtime.CoreException;
 import org.eclipse.core.runtime.IAdapterManager;
 import org.eclipse.core.runtime.IConfigurationElement;
 import org.eclipse.core.runtime.IPath;
-import org.eclipse.core.runtime.IPluginDescriptor;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.core.runtime.IStatus;
 import org.eclipse.core.runtime.Path;
 import org.eclipse.core.runtime.Platform;
 import org.eclipse.core.runtime.Status;
 import org.eclipse.core.runtime.jobs.ISchedulingRule;
+import org.eclipse.core.runtime.jobs.Job;
 import org.eclipse.jface.action.GroupMarker;
 import org.eclipse.jface.action.IMenuManager;
 import org.eclipse.jface.action.Separator;
@@ -107,7 +108,6 @@ import org.eclipse.ui.editors.text.templates.ContributionContextTypeRegistry;
 import org.eclipse.ui.editors.text.templates.ContributionTemplateStore;
 import org.eclipse.ui.ide.IDE;
 import org.eclipse.ui.plugin.AbstractUIPlugin;
-import org.eclipse.ui.texteditor.AbstractDecoratedTextEditorPreferenceConstants;
 import org.eclipse.ui.texteditor.ChainedPreferenceStore;
 import org.eclipse.ui.texteditor.ConfigurationElementSorter;
 import org.eclipse.ui.texteditor.IDocumentProvider;
@@ -119,1363 +119,1187 @@ import org.osgi.framework.BundleContext;
  * The main plugin class to be used in the desktop.
  */
 public class PHPeclipsePlugin extends AbstractUIPlugin implements
-    IPreferenceConstants {
-  /**
-   * The id of the PHP plugin (value <code>"net.sourceforge.phpeclipse"</code>).
-   */
-  public static final String PLUGIN_ID = "net.sourceforge.phpeclipse"; //$NON-NLS-1$
-
-  /**
-   * id of builder - matches plugin.xml (concatenate pluginid.builderid)
-   */
-  public static final String BUILDER_PARSER_ID = PLUGIN_ID + ".parserbuilder";
-
-  //public static final String BUILDER_INDEX_ID = PLUGIN_ID + ".indexbuilder";
-  /** General debug flag */
-  public static final boolean DEBUG = false;
-
-  /**
-   * The maximum number of allowed proposals by category
-   */
-  public final static int MAX_PROPOSALS = 200;
-
-  /**
-        * The key to store customized templates. 
+               IPreferenceConstants {
+       /**
+        * The id of the PHP plugin (value <code>"net.sourceforge.phpeclipse"</code>).
+        */
+       public static final String PLUGIN_ID = "net.sourceforge.phpeclipse"; //$NON-NLS-1$
+
+       public static final String EDITOR_ID = PHPeclipsePlugin.PLUGIN_ID
+                       + ".PHPUnitEditor";
+
+       public static final String ID_PERSPECTIVE = "net.sourceforge.phpeclipse.PHPPerspective"; //$NON-NLS-1$
+
+       IWorkspace w;
+
+       /**
+        * id of builder - matches plugin.xml (concatenate pluginid.builderid)
+        */
+       public static final String BUILDER_PARSER_ID = PLUGIN_ID + ".parserbuilder";
+
+       // public static final String BUILDER_INDEX_ID = PLUGIN_ID +
+       // ".indexbuilder";
+       /** General debug flag */
+
+       public static final boolean DEBUG = false;
+
+       /**
+        * The maximum number of allowed proposals by category
+        */
+       public final static int MAX_PROPOSALS = 200;
+
+       /**
+        * The key to store customized templates.
+        * 
         * @since 3.0
         */
-       private static final String TEMPLATES_KEY= "net.sourceforge.phpdt.ui.text.custom_templates"; //$NON-NLS-1$
+       private static final String TEMPLATES_KEY = "net.sourceforge.phpdt.ui.text.custom_templates"; //$NON-NLS-1$
+
        /**
-        * The key to store customized code templates. 
+        * The key to store customized code templates.
+        * 
+        * @since 3.0
+        */
+       private static final String CODE_TEMPLATES_KEY = "net.sourceforge.phpdt.ui.text.custom_code_templates"; //$NON-NLS-1$
+
+       public static final String PHP_CODING_ACTION_SET_ID = PLUGIN_ID
+                       + ".ui.CodingActionSet"; //$NON-NLS-1$
+
+       public final static String PHP_NATURE_ID = PLUGIN_ID + ".phpnature";
+
+       public static final String PHPPARSER_ORIGINAL = "net.sourceforge.phpdt.internal.compiler.parser.Parser";
+
+       public static final String PHPPARSER_NEW = "test.PHPParser";
+
+       /** Change this if you want to switch PHP Parser. */
+       public static final String PHPPARSER = PHPPARSER_ORIGINAL;
+
+       // The shared instance.
+       private static PHPeclipsePlugin plugin;
+
+       /**
+        * The template context type registry for the java editor.
+        * 
+        * @since 3.0
+        */
+       private ContextTypeRegistry fContextTypeRegistry;
+
+       /**
+        * The code template context type registry for the java editor.
+        * 
         * @since 3.0
         */
-       private static final String CODE_TEMPLATES_KEY= "net.sourceforge.phpdt.ui.text.custom_code_templates"; //$NON-NLS-1$
+       private ContextTypeRegistry fCodeTemplateContextTypeRegistry;
+
        /**
-        * The key to store whether the legacy templates have been migrated 
+        * The template store for the java editor.
+        * 
         * @since 3.0
         */
-//     private static final String TEMPLATES_MIGRATION_KEY= "net.sourceforge.phpdt.ui.text.templates_migrated"; //$NON-NLS-1$
+       private TemplateStore fTemplateStore;
+
        /**
-        * The key to store whether the legacy code templates have been migrated 
+        * The coded template store for the java editor.
+        * 
         * @since 3.0
         */
-//     private static final String CODE_TEMPLATES_MIGRATION_KEY= "net.sourceforge.phpdt.ui.text.code_templates_migrated"; //$NON-NLS-1$
-       
+       private TemplateStore fCodeTemplateStore;
+
+       /** Windows 9x */
+       private static final int WINDOWS_9x = 6;
+
+       /** Windows NT */
+       private static final int WINDOWS_NT = 5;
 
-  private static ExternalToolsPlugin externalTools;
+       private ImageDescriptorRegistry fImageDescriptorRegistry;
 
-  /**
-   * The Java virtual machine that we are running on.
-   */
-  private static int jvm;
+       private HashMap fIndexManagerMap = new HashMap();
 
-  /** MRJ 2.0 */
-  private static final int MRJ_2_0 = 0;
+       private IWorkingCopyManager fWorkingCopyManager;
 
-  /** MRJ 2.1 or later */
-  private static final int MRJ_2_1 = 1;
+       private IBufferFactory fBufferFactory;
 
-  /** Java on Mac OS X 10.0 (MRJ 3.0) */
-  private static final int MRJ_3_0 = 3;
+       private ICompilationUnitDocumentProvider fCompilationUnitDocumentProvider;
 
-  /** MRJ 3.1 */
-  private static final int MRJ_3_1 = 4;
+       private JavaTextTools fJavaTextTools;
 
-  /** JVM constant for any other platform */
-  private static final int OTHER = -1;
+       private ProblemMarkerManager fProblemMarkerManager;
 
-  // public static final String PHP_RESOURCES_VIEW_ID = PLUGIN_ID +
-  // ".resourcesview.ViewPHPResources"; //$NON-NLS-1$
-  public static final String PHP_CODING_ACTION_SET_ID = PLUGIN_ID
-      + ".ui.CodingActionSet"; //$NON-NLS-1$
+       private MembersOrderPreferenceCache fMembersOrderPreferenceCache;
 
-  public final static String PHP_NATURE_ID = PLUGIN_ID + ".phpnature";
+       private IFile fLastEditorFile = null;
 
-  public static final String PHPPARSER_ORIGINAL = "net.sourceforge.phpdt.internal.compiler.parser.Parser";
+       private JavaEditorTextHoverDescriptor[] fJavaEditorTextHoverDescriptors;
 
-  public static final String PHPPARSER_NEW = "test.PHPParser";
+       private JavaElementAdapterFactory fJavaElementAdapterFactory;
 
-  /** Change this if you want to switch PHP Parser. */
-  public static final String PHPPARSER = PHPPARSER_ORIGINAL;
+       // private MarkerAdapterFactory fMarkerAdapterFactory;
+       // private EditorInputAdapterFactory fEditorInputAdapterFactory;
+       private ResourceAdapterFactory fResourceAdapterFactory;
 
-  //The shared instance.
-  private static PHPeclipsePlugin plugin;
+       // private LogicalPackageAdapterFactory fLogicalPackageAdapterFactory;
+       private IPropertyChangeListener fFontPropertyChangeListener;
 
-  /** 
-        * The template context type registry for the java editor. 
+       /**
+        * Property change listener on this plugin's preference store.
+        * 
         * @since 3.0
         */
-       private ContextTypeRegistry fContextTypeRegistry;
-       /** 
-        * The code template context type registry for the java editor. 
+       // private IPropertyChangeListener fPropertyChangeListener;
+       /**
+        * The combined preference store.
+        * 
         * @since 3.0
         */
-       private ContextTypeRegistry fCodeTemplateContextTypeRegistry;
-       
+       private IPreferenceStore fCombinedPreferenceStore;
+
        /**
-        * The template store for the java editor. 
+        * The extension point registry for the
+        * <code>net.sourceforge.phpdt.ui.javaFoldingStructureProvider</code>
+        * extension point.
+        * 
         * @since 3.0
         */
-       private TemplateStore fTemplateStore;
+       private JavaFoldingStructureProviderRegistry fFoldingStructureProviderRegistry;
+
        /**
-        * The coded template store for the java editor. 
+        * Mockup preference store for firing events and registering listeners on
+        * project setting changes. FIXME: Temporary solution.
+        * 
         * @since 3.0
         */
-       private TemplateStore fCodeTemplateStore;
-       
-  /** Windows 9x */
-  private static final int WINDOWS_9x = 6;
-
-  /** Windows NT */
-  private static final int WINDOWS_NT = 5;
-
-  private ImageDescriptorRegistry fImageDescriptorRegistry;
-
-  private HashMap fIndexManagerMap = new HashMap();
-
-  private IWorkingCopyManager fWorkingCopyManager;
-
-  private IBufferFactory fBufferFactory;
-
-  private PHPDocumentProvider fCompilationUnitDocumentProvider;
-
-  private JavaTextTools fJavaTextTools;
-
-  private ProblemMarkerManager fProblemMarkerManager;
-
-  private MembersOrderPreferenceCache fMembersOrderPreferenceCache;
-
-  private IFile fLastEditorFile = null;
-
-  private JavaEditorTextHoverDescriptor[] fJavaEditorTextHoverDescriptors;
-
-  private JavaElementAdapterFactory fJavaElementAdapterFactory;
-
-  //   private MarkerAdapterFactory fMarkerAdapterFactory;
-  //   private EditorInputAdapterFactory fEditorInputAdapterFactory;
-  private ResourceAdapterFactory fResourceAdapterFactory;
-
-  //   private LogicalPackageAdapterFactory fLogicalPackageAdapterFactory;
-  private IPropertyChangeListener fFontPropertyChangeListener;
-
-  /**
-   * Property change listener on this plugin's preference store.
-   * 
-   * @since 3.0
-   */
-  private IPropertyChangeListener fPropertyChangeListener;
-
-  /**
-   * The combined preference store.
-   * 
-   * @since 3.0
-   */
-  private IPreferenceStore fCombinedPreferenceStore;
-
-  /**
-   * The extension point registry for the
-   * <code>net.sourceforge.phpdt.ui.javaFoldingStructureProvider</code> extension
-   * point.
-   * 
-   * @since 3.0
-   */
-  private JavaFoldingStructureProviderRegistry fFoldingStructureProviderRegistry;
-
-  /**
-   * Mockup preference store for firing events and registering listeners on
-   * project setting changes. FIXME: Temporary solution.
-   * 
-   * @since 3.0
-   */
-  private MockupPreferenceStore fMockupPreferenceStore;
-
-  /**
-   * The constructor.
-   */
-  public PHPeclipsePlugin(IPluginDescriptor descriptor) {
-    super(descriptor);
-    plugin = this;
-    setJVM();
-    externalTools = new ExternalToolsPlugin();
-    //    try {
-    //      resourceBundle =
-    // ResourceBundle.getBundle("net.sourceforge.PHPeclipsePluginResources");
-    //    } catch (MissingResourceException x) {
-    //      resourceBundle = null;
-    //    }
-  }
-
-  //  /**
-  //   * Returns all Java editor text hovers contributed to the workbench.
-  //   *
-  //   * @return an array of JavaEditorTextHoverDescriptor
-  //   * @since 2.1
-  //   */
-  //  public JavaEditorTextHoverDescriptor[] getJavaEditorTextHoverDescriptors()
-  // {
-  //    if (fJavaEditorTextHoverDescriptors == null)
-  //      fJavaEditorTextHoverDescriptors = JavaEditorTextHoverDescriptor
-  //          .getContributedHovers();
-  //    return fJavaEditorTextHoverDescriptors;
-  //  }
-  /**
-   * Returns all Java editor text hovers contributed to the workbench.
-   * 
-   * @return an array of JavaEditorTextHoverDescriptor
-   * @since 2.1
-   */
-  public JavaEditorTextHoverDescriptor[] getJavaEditorTextHoverDescriptors() {
-    if (fJavaEditorTextHoverDescriptors == null) {
-      fJavaEditorTextHoverDescriptors = JavaEditorTextHoverDescriptor
-          .getContributedHovers();
-      ConfigurationElementSorter sorter = new ConfigurationElementSorter() {
-        /*
-         * @see org.eclipse.ui.texteditor.ConfigurationElementSorter#getConfigurationElement(java.lang.Object)
-         */
-        public IConfigurationElement getConfigurationElement(Object object) {
-          return ((JavaEditorTextHoverDescriptor) object)
-              .getConfigurationElement();
-        }
-      };
-      sorter.sort(fJavaEditorTextHoverDescriptors);
-
-      // The Problem hover has to be the first and the Annotation hover has to
-      // be the last one in the JDT UI's hover list
-      int length = fJavaEditorTextHoverDescriptors.length;
-      int first = -1;
-      int last = length - 1;
-      int problemHoverIndex = -1;
-      int annotationHoverIndex = -1;
-      for (int i = 0; i < length; i++) {
-        if (!fJavaEditorTextHoverDescriptors[i].getId().startsWith(PLUGIN_ID)) {
-          if (problemHoverIndex == -1 || annotationHoverIndex == -1)
-            continue;
-          else {
-            last = i - 1;
-            break;
-          }
-        }
-        if (first == -1)
-          first = i;
-
-        if (fJavaEditorTextHoverDescriptors[i].getId().equals(
-            "net.sourceforge.phpdt.ui.AnnotationHover")) { //$NON-NLS-1$
-          annotationHoverIndex = i;
-          continue;
-        }
-        if (fJavaEditorTextHoverDescriptors[i].getId().equals(
-            "net.sourceforge.phpdt.ui.ProblemHover")) { //$NON-NLS-1$
-          problemHoverIndex = i;
-          continue;
-        }
-      }
-
-      JavaEditorTextHoverDescriptor hoverDescriptor = null;
-
-      if (first > -1 && problemHoverIndex > -1 && problemHoverIndex != first) {
-        // move problem hover to beginning
-        hoverDescriptor = fJavaEditorTextHoverDescriptors[first];
-        fJavaEditorTextHoverDescriptors[first] = fJavaEditorTextHoverDescriptors[problemHoverIndex];
-        fJavaEditorTextHoverDescriptors[problemHoverIndex] = hoverDescriptor;
-
-        // update annotation hover index if needed
-        if (annotationHoverIndex == first)
-          annotationHoverIndex = problemHoverIndex;
-      }
-
-      if (annotationHoverIndex > -1 && annotationHoverIndex != last) {
-        // move annotation hover to end
-        hoverDescriptor = fJavaEditorTextHoverDescriptors[last];
-        fJavaEditorTextHoverDescriptors[last] = fJavaEditorTextHoverDescriptors[annotationHoverIndex];
-        fJavaEditorTextHoverDescriptors[annotationHoverIndex] = hoverDescriptor;
-      }
-
-      // Move Best Match hover to front
-      for (int i = 0; i < fJavaEditorTextHoverDescriptors.length - 1; i++) {
-        if (PreferenceConstants.ID_BESTMATCH_HOVER
-            .equals(fJavaEditorTextHoverDescriptors[i].getId())) {
-          hoverDescriptor = fJavaEditorTextHoverDescriptors[i];
-          for (int j = i; j > 0; j--)
-            fJavaEditorTextHoverDescriptors[j] = fJavaEditorTextHoverDescriptors[j - 1];
-          fJavaEditorTextHoverDescriptors[0] = hoverDescriptor;
-          break;
-        }
-
-      }
-    }
-
-    return fJavaEditorTextHoverDescriptors;
-  }
-
-  /**
-   * Resets the Java editor text hovers contributed to the workbench.
-   * <p>
-   * This will force a rebuild of the descriptors the next time a client asks
-   * for them.
-   * </p>
-   * 
-   * @return an array of JavaEditorTextHoverDescriptor
-   * @since 2.1
-   */
-  public void resetJavaEditorTextHoverDescriptors() {
-    fJavaEditorTextHoverDescriptors = null;
-  }
-
-  /**
-   * Creates the PHP plugin standard groups in a context menu.
-   */
-  public static void createStandardGroups(IMenuManager menu) {
-    if (!menu.isEmpty())
-      return;
-    menu.add(new Separator(IContextMenuConstants.GROUP_NEW));
-    menu.add(new GroupMarker(IContextMenuConstants.GROUP_GOTO));
-    menu.add(new Separator(IContextMenuConstants.GROUP_OPEN));
-    menu.add(new GroupMarker(IContextMenuConstants.GROUP_SHOW));
-    menu.add(new Separator(IContextMenuConstants.GROUP_REORGANIZE));
-    menu.add(new Separator(IContextMenuConstants.GROUP_GENERATE));
-    menu.add(new Separator(IContextMenuConstants.GROUP_SEARCH));
-    menu.add(new Separator(IContextMenuConstants.GROUP_BUILD));
-    menu.add(new Separator(IContextMenuConstants.GROUP_ADDITIONS));
-    menu.add(new Separator(IContextMenuConstants.GROUP_VIEWER_SETUP));
-    menu.add(new Separator(IContextMenuConstants.GROUP_PROPERTIES));
-  }
-
-  public static IWorkbenchPage getActivePage() {
-    return getDefault().internalGetActivePage();
-  }
-
-  public static Shell getActiveWorkbenchShell() {
-    return getActiveWorkbenchWindow().getShell();
-  }
-
-  /**
-   * Returns an array of all editors that have an unsaved content. If the
-   * identical content is presented in more than one editor, only one of those
-   * editor parts is part of the result.
-   * 
-   * @return an array of all dirty editor parts.
-   */
-  public static IEditorPart[] getDirtyEditors() {
-    Set inputs = new HashSet();
-    List result = new ArrayList(0);
-    IWorkbench workbench = getDefault().getWorkbench();
-    IWorkbenchWindow[] windows = workbench.getWorkbenchWindows();
-    for (int i = 0; i < windows.length; i++) {
-      IWorkbenchPage[] pages = windows[i].getPages();
-      for (int x = 0; x < pages.length; x++) {
-        IEditorPart[] editors = pages[x].getDirtyEditors();
-        for (int z = 0; z < editors.length; z++) {
-          IEditorPart ep = editors[z];
-          IEditorInput input = ep.getEditorInput();
-          if (!inputs.contains(input)) {
-            inputs.add(input);
-            result.add(ep);
-          }
-        }
-      }
-    }
-    return (IEditorPart[]) result.toArray(new IEditorPart[result.size()]);
-  }
-
-  public static IWorkbenchWindow getActiveWorkbenchWindow() {
-    return getDefault().getWorkbench().getActiveWorkbenchWindow();
-  }
-
-  /**
-   * Returns the shared instance.
-   */
-  public static PHPeclipsePlugin getDefault() {
-    return plugin;
-  }
-
-  public static ImageDescriptorRegistry getImageDescriptorRegistry() {
-    return getDefault().internalGetImageDescriptorRegistry();
-  }
-
-  static IPath getInstallLocation() {
-    return new Path(getDefault().getDescriptor().getInstallURL().getFile());
-  }
-
-  public static int getJVM() {
-    return jvm;
-  }
-
-  public static String getPluginId() {
-    return getDefault().getDescriptor().getUniqueIdentifier();
-  }
-
-  /**
-   * Returns the standard display to be used. The method first checks, if the
-   * thread calling this method has an associated display. If so, this display
-   * is returned. Otherwise the method returns the default display.
-   */
-  public static Display getStandardDisplay() {
-    Display display = Display.getCurrent();
-    if (display == null) {
-      display = Display.getDefault();
-    }
-    return display;
-  }
-
-  //  public static ExternalToolsPlugin getExternalTools() {
-  //    return externalTools;
-  //  }
-  /**
-   * Returns the workspace instance.
-   */
-  public static IWorkspace getWorkspace() {
-    return ResourcesPlugin.getWorkspace();
-  }
-
-  public static boolean isDebug() {
-    return getDefault().isDebugging();
-  }
-
-  //  public static void logErrorMessage(String message) {
-  //    log(new Status(IStatus.ERROR, getPluginId(),
-  // JavaStatusConstants.INTERNAL_ERROR, message, null));
-  //  }
-  //
-  //  public static void logErrorStatus(String message, IStatus status) {
-  //    if (status == null) {
-  //      logErrorMessage(message);
-  //      return;
-  //    }
-  //    MultiStatus multi= new MultiStatus(getPluginId(),
-  // JavaStatusConstants.INTERNAL_ERROR, message, null);
-  //    multi.add(status);
-  //    log(multi);
-  //  }
-  //
-  //  public static void log(Throwable e) {
-  //    log(new Status(IStatus.ERROR, getPluginId(),
-  // JavaStatusConstants.INTERNAL_ERROR,
-  // JavaUIMessages.getString("JavaPlugin.internal_error"), e)); //$NON-NLS-1$
-  //  }
-  public static void log(int severity, String message) {
-    Status status = new Status(severity, PLUGIN_ID, IStatus.OK, message, null);
-    log(status);
-  }
-
-  public static void log(IStatus status) {
-    getDefault().getLog().log(status);
-  }
-
-  public static void log(Throwable e) {
-    log(new Status(IStatus.ERROR, PLUGIN_ID, IStatus.ERROR,
-        "PHPeclipsePlugin.internalErrorOccurred", e)); //$NON-NLS-1$
-  }
-
-  public static void logErrorMessage(String message) {
-    log(new Status(IStatus.ERROR, getPluginId(),
-        IJavaStatusConstants.INTERNAL_ERROR, message, null));
-  }
-
-  private static void setJVM() {
-    String osName = System.getProperty("os.name");
-    if (osName.startsWith("Mac OS")) {
-      String mrjVersion = System.getProperty("mrj.version");
-      String majorMRJVersion = mrjVersion.substring(0, 3);
-      jvm = OTHER;
-      try {
-        double version = Double.valueOf(majorMRJVersion).doubleValue();
-        if (version == 2) {
-          jvm = MRJ_2_0;
-        } else if (version >= 2.1 && version < 3) {
-          jvm = MRJ_2_1;
-        } else if (version == 3.0) {
-          jvm = MRJ_3_0;
-        } else if (version >= 3.1) {
-          jvm = MRJ_3_1;
-        }
-      } catch (NumberFormatException nfe) {
-      }
-    } else if (osName.startsWith("Windows")) {
-      if (osName.indexOf("9") != -1) {
-        jvm = WINDOWS_9x;
-      } else {
-        jvm = WINDOWS_NT;
-      }
-    }
-  }
-
-  // TODO: refactor this into a better method name !
-  public synchronized PHPDocumentProvider getCompilationUnitDocumentProvider() {
-    if (fCompilationUnitDocumentProvider == null)
-      fCompilationUnitDocumentProvider = new PHPDocumentProvider();
-    return fCompilationUnitDocumentProvider;
-  }
-
-  /**
-   * Get the identifier index manager for the given project
-   * 
-   * @param iProject
-   *          the current project
-   * @return
-   */
-  public IdentifierIndexManager getIndexManager(IProject iProject) {
-    String indexFilename = iProject.getLocation() + File.separator
-        + "project.index";
-    IdentifierIndexManager indexManager = (IdentifierIndexManager) fIndexManagerMap
-        .get(indexFilename);
-    if (indexManager == null) {
-      indexManager = new IdentifierIndexManager(indexFilename);
-      fIndexManagerMap.put(indexFilename, indexManager);
-    }
-    return indexManager;
-  }
-
-  public synchronized IWorkingCopyManager getWorkingCopyManager() {
-    if (fWorkingCopyManager == null) {
-      PHPDocumentProvider provider = getCompilationUnitDocumentProvider();
-      fWorkingCopyManager = new WorkingCopyManager(provider);
-    }
-    return fWorkingCopyManager;
-  }
-
-  public synchronized MembersOrderPreferenceCache getMemberOrderPreferenceCache() {
-    if (fMembersOrderPreferenceCache == null)
-      fMembersOrderPreferenceCache = new MembersOrderPreferenceCache();
-    return fMembersOrderPreferenceCache;
-  }
-
-  /**
-   * Returns the mockup preference store for firing events and registering
-   * listeners on project setting changes. Temporary solution.
-   */
-  public MockupPreferenceStore getMockupPreferenceStore() {
-    if (fMockupPreferenceStore == null)
-      fMockupPreferenceStore = new MockupPreferenceStore();
-
-    return fMockupPreferenceStore;
-  }
-
-  public synchronized ProblemMarkerManager getProblemMarkerManager() {
-    if (fProblemMarkerManager == null)
-      fProblemMarkerManager = new ProblemMarkerManager();
-    return fProblemMarkerManager;
-  }
-
-  //  public synchronized JavaTextTools getJavaTextTools() {
-  //    if (fJavaTextTools == null)
-  //      fJavaTextTools = new JavaTextTools(getPreferenceStore());
-  //    return fJavaTextTools;
-  //  }
-  public synchronized JavaTextTools getJavaTextTools() {
-    if (fJavaTextTools == null)
-      fJavaTextTools = new JavaTextTools(getPreferenceStore(), JavaCore
-          .getPlugin().getPluginPreferences());
-    return fJavaTextTools;
-  }
-
-  public IFile getLastEditorFile() {
-    return fLastEditorFile;
-  }
-
-  /**
-   * Returns the string from the plugin's resource bundle, or 'key' if not
-   * found.
-   */
-  //  public static String getResourceString(String key) {
-  //    ResourceBundle bundle = PHPeclipsePlugin.getDefault().getResourceBundle();
-  //    try {
-  //      return bundle.getString(key);
-  //    } catch (MissingResourceException e) {
-  //      return key;
-  //    }
-  //  }
-  /**
-   * Returns the plugin's resource bundle,
-   */
-  //  public ResourceBundle getResourceBundle() {
-  //    return resourceBundle;
-  //  }
-  protected void initializeDefaultPreferences(IPreferenceStore store) {
-    // windows preferences:
-    //    store.setDefault(LOCALHOST_PREF, "http://localhost");
-    //    store.setDefault(DOCUMENTROOT_PREF,
-    // getWorkspace().getRoot().getLocation().toString());
-//    store.setDefault(PHP_LOCALHOST_PREF, "http://localhost");
-//    store.setDefault(PHP_DOCUMENTROOT_PREF, getWorkspace().getRoot()
-//        .getLocation().toString());
-
-    //    store.setDefault(SHOW_EXTERNAL_PREVIEW_PREF, "true");
-    store.setDefault(USE_EXTERNAL_BROWSER_PREF, "false");
-    store.setDefault(SHOW_OUTPUT_IN_CONSOLE, "true");
-    store.setDefault(PHP_OBFUSCATOR_DEFAULT, "c:\\temp");
-//    store.setDefault(PHP_BOOKMARK_DEFAULT, "");
-//
-//    store.setDefault(PHP_AUTO_PREVIEW_DEFAULT, "true");
-//    store.setDefault(PHP_BRING_TO_TOP_PREVIEW_DEFAULT, "true");
-//    store.setDefault(PHP_SHOW_HTML_FILES_LOCAL, "true");
-
-    String windowsSystem = Platform.getWS();
-    if (jvm == WINDOWS_9x) {
-      store.setDefault(EXTERNAL_BROWSER_PREF,
-          "command.com /c start iexplore {0}");
-    } else if (windowsSystem.equals(Platform.WS_WIN32)) {
-      store.setDefault(EXTERNAL_BROWSER_PREF,
-          "rundll32 url.dll,FileProtocolHandler {0}");
-    } else if (windowsSystem.equals(Platform.WS_CARBON)) {
-      // TODO How do we start Safari on Mac OS X ?
-      store.setDefault(EXTERNAL_BROWSER_PREF, "netscape {0}");
-    } else {
-      store.setDefault(PHP_OBFUSCATOR_DEFAULT, "/tmp");
-      store.setDefault(EXTERNAL_BROWSER_PREF, "netscape {0}");
-    }
-    //  if ((jvm == WINDOWS_9x) || (jvm == WINDOWS_NT)) {
-    // 
-    if (windowsSystem.equals(Platform.WS_WIN32)) {
-      store.setDefault(PHP_RUN_PREF, "c:\\apache\\php\\php.exe");
-      store.setDefault(EXTERNAL_PARSER_PREF, "c:\\apache\\php\\php -l -f {0}");
-      store.setDefault(MYSQL_RUN_PREF, "c:\\apache\\mysql\\bin\\mysqld-nt.exe");
-      store.setDefault(APACHE_RUN_PREF, "c:\\apache\\apache.exe");
-    } else {
-      store.setDefault(PHP_RUN_PREF, "/apache/php/php");
-      store.setDefault(EXTERNAL_PARSER_PREF, "/apache/php/php -l -f {0}");
-      store.setDefault(MYSQL_RUN_PREF, "/apache/mysql/bin/mysqld");
-      store.setDefault(APACHE_RUN_PREF, "/apache/apache");
-    }
-    store.setDefault(MYSQL_PREF, "--standalone");
-    store.setDefault(APACHE_START_PREF, "-c \"DocumentRoot \"{0}\"\"");
-    store.setDefault(APACHE_STOP_PREF, "-k shutdown");
-    store.setDefault(APACHE_RESTART_PREF, "-k restart");
-    store.setDefault(MYSQL_START_BACKGROUND, "true");
-    store.setDefault(APACHE_START_BACKGROUND, "true");
-    store.setDefault(APACHE_STOP_BACKGROUND, "true");
-    store.setDefault(APACHE_RESTART_BACKGROUND, "true");
-    //    store.setDefault(PHP_PARSER_DEFAULT, PHP_EXTERNAL_PARSER);
-    //    store.setDefault(PHP_INTERNAL_PARSER, "false");
-    //    store.setDefault(PHP_EXTERNAL_PARSER, "true");
-    //    store.setDefault(PHP_PARSE_ON_SAVE, "true");
-    // show line numbers:
-    //   store.setDefault(LINE_NUMBER_RULER, "false");
-    //    store.setDefault(FORMATTER_TAB_SIZE, "4");
-    // php syntax highlighting
-    store.setDefault(PHP_USERDEF_XMLFILE, "");
-    //assume there is none chooA
-    PreferenceConverter.setDefault(store, PHP_MULTILINE_COMMENT,
-        PHPColorProvider.MULTI_LINE_COMMENT);
-    PreferenceConverter.setDefault(store, PHP_SINGLELINE_COMMENT,
-        PHPColorProvider.SINGLE_LINE_COMMENT);
-    PreferenceConverter.setDefault(store, PHP_TAG, PHPColorProvider.TAG);
-    PreferenceConverter
-        .setDefault(store, PHP_KEYWORD, PHPColorProvider.KEYWORD);
-    PreferenceConverter.setDefault(store, PHP_VARIABLE,
-        PHPColorProvider.VARIABLE);
-    PreferenceConverter.setDefault(store, PHP_FUNCTIONNAME,
-        PHPColorProvider.FUNCTION_NAME);
-    PreferenceConverter.setDefault(store, PHP_CONSTANT,
-        PHPColorProvider.CONSTANT);
-    PreferenceConverter.setDefault(store, PHP_TYPE, PHPColorProvider.TYPE);
-    PreferenceConverter.setDefault(store, PHP_STRING, PHPColorProvider.STRING);
-    PreferenceConverter
-        .setDefault(store, PHP_DEFAULT, PHPColorProvider.DEFAULT);
-    PreferenceConverter.setDefault(store, PHPDOC_KEYWORD,
-        PHPColorProvider.PHPDOC_KEYWORD);
-    PreferenceConverter.setDefault(store, PHPDOC_TAG,
-        PHPColorProvider.PHPDOC_TAG);
-    PreferenceConverter.setDefault(store, PHPDOC_LINK,
-        PHPColorProvider.PHPDOC_LINK);
-    PreferenceConverter.setDefault(store, PHPDOC_DEFAULT,
-        PHPColorProvider.PHPDOC_DEFAULT);
-
-    PreferenceConverter.setDefault(store, EDITOR_PHP_KEYWORD_RETURN_COLOR,
-        new RGB(127, 0, 85));
-    store.setDefault(EDITOR_PHP_KEYWORD_RETURN_BOLD, true);
-    store.setDefault(EDITOR_PHP_KEYWORD_RETURN_ITALIC, false);
-
-    PreferenceConverter.setDefault(store, EDITOR_PHP_OPERATOR_COLOR, new RGB(0,
-        0, 0));
-    store.setDefault(EDITOR_PHP_OPERATOR_BOLD, false);
-    store.setDefault(EDITOR_PHP_OPERATOR_ITALIC, false);
-
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      PHP_EDITOR_BACKGROUND,
-    //      PHPColorProvider.BACKGROUND);
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      LINKED_POSITION_COLOR,
-    //      PHPColorProvider.LINKED_POSITION_COLOR);
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      LINE_NUMBER_COLOR,
-    //      PHPColorProvider.LINE_NUMBER_COLOR);
-    //    // set default PHPDoc colors:
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      PHPDOC_KEYWORD,
-    //      PHPColorProvider.PHPDOC_KEYWORD);
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      PHPDOC_LINK,
-    //      PHPColorProvider.PHPDOC_LINK);
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      PHPDOC_DEFAULT,
-    //      PHPColorProvider.PHPDOC_DEFAULT);
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      PHPDOC_TAG,
-    //      PHPColorProvider.PHPDOC_TAG);
-    //    store.setDefault(PREFERENCE_COLOR_BACKGROUND_SYSTEM_DEFAULT, "true");
-    //    PreferenceConverter.setDefault(
-    //      store,
-    //      PREFERENCE_COLOR_BACKGROUND,
-    //      PHPColorProvider.BACKGROUND_COLOR);
-    //language stuff
-    //    store.setDefault(RESOURCE_BUNDLE, LANGUAGE_DEFAULT);
-    //    store.setDefault(RESOURCE_BUNDLE_EN_GB, "true");
-    //    store.setDefault(RESOURCE_BUNDLE_DE, "false");
-    //    store.setDefault(RESOURCE_BUNDLE_FR, "false");
-    //    store.setDefault(RESOURCE_BUNDLE_ES, "false");
-//    TemplatePreferencePage.initDefaults(store);
-    //this will initialize the static fields in the syntaxrdr class
-    new PHPSyntaxRdr();
-    JavaCore.initializeDefaultPluginPreferences();
-    PreferenceConstants.initializeDefaultValues(store);
-    externalTools.initializeDefaultPreferences(store);
-    MarkerAnnotationPreferences.initializeDefaultValues(store);
-  }
-
-  private IWorkbenchPage internalGetActivePage() {
-    IWorkbenchWindow window = getWorkbench().getActiveWorkbenchWindow();
-    if (window != null)
-      return window.getActivePage();
-    return null;
-  }
-
-  private ImageDescriptorRegistry internalGetImageDescriptorRegistry() {
-    if (fImageDescriptorRegistry == null)
-      fImageDescriptorRegistry = new ImageDescriptorRegistry();
-    return fImageDescriptorRegistry;
-  }
-
-  /**
-   * Open a file in the Workbench that may or may not exist in the workspace.
-   * Must be run on the UI thread.
-   * 
-   * @param filename
-   * @throws CoreException
-   */
-  public ITextEditor openFileInTextEditor(String filename) throws CoreException {
-    // reject directories
-    if (new File(filename).isDirectory())
-      return null;
-    IWorkbench workbench = PlatformUI.getWorkbench();
-    IWorkbenchWindow window = workbench.getWorkbenchWindows()[0];
-    IWorkbenchPage page = window.getActivePage();
-    IPath path = new Path(filename);
-    // If the file exists in the workspace, open it
-    IFile file = getWorkspace().getRoot().getFileForLocation(path);
-    IEditorPart editor;
-    ITextEditor textEditor;
-    if (file != null && file.exists()) {
-      editor = IDE.openEditor(page, file, true);
-      textEditor = (ITextEditor) editor.getAdapter(ITextEditor.class);
-    } else {
-      // Otherwise open the stream directly
-      if (page == null)
-        return null;
-      FileStorage storage = new FileStorage(path);
-      IEditorRegistry registry = getWorkbench().getEditorRegistry();
-      IEditorDescriptor desc = registry.getDefaultEditor(filename);
-      if (desc == null) {
-        desc = registry.findEditor(IEditorRegistry.SYSTEM_EXTERNAL_EDITOR_ID);
-        //   desc = registry.getDefaultEditor();
-      }
-      IEditorInput input = new ExternalEditorInput(storage);
-      editor = page.openEditor(input, desc.getId());
-      textEditor = (ITextEditor) editor.getAdapter(ITextEditor.class);
-      // If the storage provider is not ours, we can't guarantee read/write.
-      if (textEditor != null) {
-        IDocumentProvider documentProvider = textEditor.getDocumentProvider();
-        if (!(documentProvider instanceof ExternalStorageDocumentProvider)) {
-          storage.setReadOnly();
-        }
-      }
-    }
-    return textEditor;
-  }
-
-  /**
-   * Open a file in the Workbench that may or may not exist in the workspace.
-   * Must be run on the UI thread.
-   * 
-   * @param filename
-   * @param line
-   * @throws CoreException
-   */
-  public void openFileAndGotoLine(String filename, int line)
-      throws CoreException {
-    ITextEditor textEditor = openFileInTextEditor(filename);
-    if (textEditor != null) {
-      // If a line number was given, go to it
-      if (line > 0) {
-        try {
-          line--; // document is 0 based
-          IDocument document = textEditor.getDocumentProvider().getDocument(
-              textEditor.getEditorInput());
-          textEditor.selectAndReveal(document.getLineOffset(line), document
-              .getLineLength(line));
-        } catch (BadLocationException e) {
-          // invalid text position -> do nothing
-        }
-      }
-    }
-  }
-
-  /**
-   * Open a file in the Workbench that may or may not exist in the workspace.
-   * Must be run on the UI thread.
-   * 
-   * @param filename
-   * @param offset
-   * @throws CoreException
-   */
-  public void openFileAndGotoOffset(String filename, int offset, int length)
-      throws CoreException {
-    ITextEditor textEditor = openFileInTextEditor(filename);
-    if (textEditor != null) {
-      // If a line number was given, go to it
-      if (offset >= 0) {
-        IDocument document = textEditor.getDocumentProvider().getDocument(
-            textEditor.getEditorInput());
-        textEditor.selectAndReveal(offset, length);
-      }
-    }
-  }
-
-  public void openFileAndFindString(String filename, String findString)
-      throws CoreException {
-    ITextEditor textEditor = openFileInTextEditor(filename);
-    if (textEditor != null) {
-      //               If a string was given, go to it
-      if (findString != null) {
-        try {
-          IDocument document = textEditor.getDocumentProvider().getDocument(
-              textEditor.getEditorInput());
-          int offset = document.search(0, findString, true, false, true);
-          textEditor.selectAndReveal(offset, findString.length());
-        } catch (BadLocationException e) {
-          // invalid text position -> do nothing
-        }
-      }
-    }
-  }
-
-  public void setLastEditorFile(IFile textEditor) {
-    this.fLastEditorFile = textEditor;
-  }
-
-  /*
-   * @see org.eclipse.core.runtime.Plugin#stop
-   */
-  public void stop(BundleContext context) throws Exception {
-    try {
-      //                       JavaCore.stop(this, context);
-      plugin.savePluginPreferences();
-      IWorkspace workspace = ResourcesPlugin.getWorkspace();
-      workspace.removeResourceChangeListener(JavaModelManager
-          .getJavaModelManager().deltaState);
-      workspace.removeSaveParticipant(plugin);
-
-      JavaModelManager.getJavaModelManager().shutdown();
-
-      ColorManager.getDefault().dispose();
-      // save the information from the php index files if necessary
-      Collection collection = fIndexManagerMap.values();
-      Iterator iterator = collection.iterator();
-      IdentifierIndexManager indexManager = null;
-      while (iterator.hasNext()) {
-        indexManager = (IdentifierIndexManager) iterator.next();
-        indexManager.writeFile();
-      }
-      if (fImageDescriptorRegistry != null)
-        fImageDescriptorRegistry.dispose();
-
-      //                       AllTypesCache.terminate();
-
-      if (fImageDescriptorRegistry != null)
-        fImageDescriptorRegistry.dispose();
-
-      unregisterAdapters();
-
-      //                       if (fASTProvider != null) {
-      //                               fASTProvider.dispose();
-      //                               fASTProvider= null;
-      //                       }
-
-      if (fWorkingCopyManager != null) {
-        fWorkingCopyManager.shutdown();
-        fWorkingCopyManager = null;
-      }
-
-      if (fCompilationUnitDocumentProvider != null) {
-        fCompilationUnitDocumentProvider.shutdown();
-        fCompilationUnitDocumentProvider = null;
-      }
-
-      if (fJavaTextTools != null) {
-        fJavaTextTools.dispose();
-        fJavaTextTools = null;
-      }
-      //                       JavaDocLocations.shutdownJavadocLocations();
-
-      uninstallPreferenceStoreBackwardsCompatibility();
-
-      //                       RefactoringCore.getUndoManager().shutdown();
-    } finally {
-      super.stop(context);
-    }
-  }
-
-  /**
-   * @see org.eclipse.ui.plugin.AbstractUIPlugin#shutdown()
-   */
-  //  public void shutdown() throws CoreException {
-  //    // moved down (see below):
-  //    // super.shutdown();
-  //    // externalTools.shutDown();
-  //    ColorManager.getDefault().dispose();
-  //    // save the information from the php index files if necessary
-  //    Collection collection = fIndexManagerMap.values();
-  //    Iterator iterator = collection.iterator();
-  //    IdentifierIndexManager indexManager = null;
-  //    while (iterator.hasNext()) {
-  //      indexManager = (IdentifierIndexManager) iterator.next();
-  //      indexManager.writeFile();
-  //    }
-  //    if (fImageDescriptorRegistry != null)
-  //      fImageDescriptorRegistry.dispose();
-  //    // unregisterAdapters();
-  //    super.shutdown();
-  //    if (fWorkingCopyManager != null) {
-  //      fWorkingCopyManager.shutdown();
-  //      fWorkingCopyManager = null;
-  //    }
-  //    if (fCompilationUnitDocumentProvider != null) {
-  //      fCompilationUnitDocumentProvider.shutdown();
-  //      fCompilationUnitDocumentProvider = null;
-  //    }
-  //    if (fJavaTextTools != null) {
-  //      fJavaTextTools.dispose();
-  //      fJavaTextTools = null;
-  //    }
-  //    // JavaDocLocations.shutdownJavadocLocations();
-  //    //
-  //    //
-  // JFaceResources.getFontRegistry().removeListener(fFontPropertyChangeListener);
-  //    // begin JavaCore#shutdown()
-  //    //savePluginPreferences();
-  //    savePluginPreferences();
-  //    IWorkspace workspace = ResourcesPlugin.getWorkspace();
-  //   workspace.removeResourceChangeListener(JavaModelManager.getJavaModelManager().deltaState);
-  //   workspace.removeSaveParticipant(this);
-  //   ((JavaModelManager) JavaModelManager.getJavaModelManager()).shutdown();
-  //    // end JavaCore#shutdown()
-  //  }
-  /**
-   * Installs backwards compatibility for the preference store.
-   */
-  private void installPreferenceStoreBackwardsCompatibility() {
-
-    /*
-     * Installs backwards compatibility: propagate the Java editor font from a
-     * pre-2.1 plug-in to the Platform UI's preference store to preserve the
-     * Java editor font from a pre-2.1 workspace. This is done only once.
-     */
-    String fontPropagatedKey = "fontPropagated"; //$NON-NLS-1$
-    if (getPreferenceStore().contains(JFaceResources.TEXT_FONT)
-        && !getPreferenceStore().isDefault(JFaceResources.TEXT_FONT)) {
-      if (!getPreferenceStore().getBoolean(fontPropagatedKey))
-        PreferenceConverter.setValue(PlatformUI.getWorkbench()
-            .getPreferenceStore(), PreferenceConstants.EDITOR_TEXT_FONT,
-            PreferenceConverter.getFontDataArray(getPreferenceStore(),
-                JFaceResources.TEXT_FONT));
-    }
-    getPreferenceStore().setValue(fontPropagatedKey, true);
-
-    /*
-     * Backwards compatibility: set the Java editor font in this plug-in's
-     * preference store to let older versions access it. Since 2.1 the Java
-     * editor font is managed by the workbench font preference page.
-     */
-    PreferenceConverter.putValue(getPreferenceStore(),
-        JFaceResources.TEXT_FONT, JFaceResources.getFontRegistry().getFontData(
-            PreferenceConstants.EDITOR_TEXT_FONT));
-
-    fFontPropertyChangeListener = new IPropertyChangeListener() {
-      public void propertyChange(PropertyChangeEvent event) {
-        if (PreferenceConstants.EDITOR_TEXT_FONT.equals(event.getProperty()))
-          PreferenceConverter.putValue(getPreferenceStore(),
-              JFaceResources.TEXT_FONT, JFaceResources.getFontRegistry()
-                  .getFontData(PreferenceConstants.EDITOR_TEXT_FONT));
-      }
-    };
-    JFaceResources.getFontRegistry().addListener(fFontPropertyChangeListener);
-
-    /*
-     * Backwards compatibility: propagate the Java editor tab width from a
-     * pre-3.0 plug-in to the new preference key. This is done only once.
-     */
-    final String oldTabWidthKey = PreferenceConstants.EDITOR_TAB_WIDTH;
-    final String newTabWidthKey = AbstractDecoratedTextEditorPreferenceConstants.EDITOR_TAB_WIDTH;
-    String tabWidthPropagatedKey = "tabWidthPropagated"; //$NON-NLS-1$
-    if (getPreferenceStore().contains(oldTabWidthKey)
-        && !getPreferenceStore().isDefault(oldTabWidthKey)) {
-      if (!getPreferenceStore().getBoolean(tabWidthPropagatedKey))
-        getPreferenceStore().setValue(newTabWidthKey,
-            getPreferenceStore().getInt(oldTabWidthKey));
-    }
-    getPreferenceStore().setValue(tabWidthPropagatedKey, true);
-
-    /*
-     * Backwards compatibility: set the Java editor tab width in this plug-in's
-     * preference store with the old key to let older versions access it. Since
-     * 3.0 the tab width is managed by the extended texteditor and uses a new
-     * key.
-     */
-    getPreferenceStore().putValue(oldTabWidthKey,
-        getPreferenceStore().getString(newTabWidthKey));
-
-    fPropertyChangeListener = new IPropertyChangeListener() {
-      public void propertyChange(PropertyChangeEvent event) {
-        if (newTabWidthKey.equals(event.getProperty()))
-          getPreferenceStore().putValue(oldTabWidthKey,
-              getPreferenceStore().getString(newTabWidthKey));
-      }
-    };
-    getPreferenceStore().addPropertyChangeListener(fPropertyChangeListener);
-
-    /*
-     * Backward compatibility for the refactoring preference key.
-     */
-    //         getPreferenceStore().setValue(
-    //                 PreferenceConstants.REFACTOR_ERROR_PAGE_SEVERITY_THRESHOLD,
-    //                 RefactoringCore.getConditionCheckingFailedSeverity());
-  }
-
-  /**
-   * Uninstalls backwards compatibility for the preference store.
-   */
-  private void uninstallPreferenceStoreBackwardsCompatibility() {
-    JFaceResources.getFontRegistry()
-        .removeListener(fFontPropertyChangeListener);
-    getPreferenceStore().removePropertyChangeListener(fPropertyChangeListener);
-  }
-
-  /*
-   * (non - Javadoc) Method declared in Plugin
-   */
-  public void start(BundleContext context) throws Exception {
-    super.start(context);
-    
-    //         JavaCore.start(this, context);
-    final JavaModelManager manager = JavaModelManager.getJavaModelManager();
-    try {
-      manager.configurePluginDebugOptions();
-
-      // request state folder creation (workaround 19885)
-      //      JavaCore.getPlugin().getStateLocation();
-      getStateLocation();
-      // retrieve variable values
-      //JavaCore.getPlugin().getPluginPreferences().addPropertyChangeListener(new
-      // JavaModelManager.PluginPreferencesListener());
-      //                       manager.loadVariablesAndContainers();
-
-      final IWorkspace workspace = ResourcesPlugin.getWorkspace();
-               workspace.addResourceChangeListener(
-                       manager.deltaState,
-                       IResourceChangeEvent.PRE_BUILD
-                               | IResourceChangeEvent.POST_BUILD
-                               | IResourceChangeEvent.POST_CHANGE
-                               | IResourceChangeEvent.PRE_DELETE
-                               | IResourceChangeEvent.PRE_CLOSE);
-
-//             startIndexing();
-               ISavedState savedState = workspace.addSaveParticipant(PHPeclipsePlugin.this, manager);
-
-               // process deltas since last activated in indexer thread so that indexes are up-to-date.
-               // see https://bugs.eclipse.org/bugs/show_bug.cgi?id=38658
-//             Job processSavedState = new Job(Util.bind("savedState.jobName")) { //$NON-NLS-1$
-//                     protected IStatus run(IProgressMonitor monitor) {
-//                             try {
-//                                     // add save participant and process delta atomically
-//                                     // see https://bugs.eclipse.org/bugs/show_bug.cgi?id=59937
-//                                     workspace.run(
-//                                             new IWorkspaceRunnable() {
-//                                                     public void run(IProgressMonitor progress) throws CoreException {
-//                                                             ISavedState savedState = workspace.addSaveParticipant(PHPeclipsePlugin.this, manager);
+       private MockupPreferenceStore fMockupPreferenceStore;
+
+       /**
+        * The constructor.
+        */
+       public PHPeclipsePlugin() {
+               super();
+               plugin = this;
+               // externalTools = new ExternalToolsPlugin();
+
+               // try {
+               // resourceBundle =
+               // ResourceBundle.getBundle("net.sourceforge.PHPeclipsePluginResources");
+               // } catch (MissingResourceException x) {
+               // resourceBundle = null;
+               // }
+       }
+
+       // /**
+       // * Returns all Java editor text hovers contributed to the workbench.
+       // *
+       // * @return an array of JavaEditorTextHoverDescriptor
+       // * @since 2.1
+       // */
+       // public JavaEditorTextHoverDescriptor[]
+       // getJavaEditorTextHoverDescriptors()
+       // {
+       // if (fJavaEditorTextHoverDescriptors == null)
+       // fJavaEditorTextHoverDescriptors = JavaEditorTextHoverDescriptor
+       // .getContributedHovers();
+       // return fJavaEditorTextHoverDescriptors;
+       // }
+       /**
+        * Returns all Java editor text hovers contributed to the workbench.
+        * 
+        * @return an array of JavaEditorTextHoverDescriptor
+        * @since 2.1
+        */
+       public JavaEditorTextHoverDescriptor[] getJavaEditorTextHoverDescriptors() {
+               if (fJavaEditorTextHoverDescriptors == null) {
+                       fJavaEditorTextHoverDescriptors = JavaEditorTextHoverDescriptor
+                                       .getContributedHovers();
+                       ConfigurationElementSorter sorter = new ConfigurationElementSorter() {
+                               /*
+                                * @see org.eclipse.ui.texteditor.ConfigurationElementSorter#getConfigurationElement(java.lang.Object)
+                                */
+                               public IConfigurationElement getConfigurationElement(
+                                               Object object) {
+                                       return ((JavaEditorTextHoverDescriptor) object)
+                                                       .getConfigurationElement();
+                               }
+                       };
+                       sorter.sort(fJavaEditorTextHoverDescriptors);
+
+                       // The Problem hover has to be the first and the Annotation hover
+                       // has to
+                       // be the last one in the JDT UI's hover list
+                       int length = fJavaEditorTextHoverDescriptors.length;
+                       int first = -1;
+                       int last = length - 1;
+                       int problemHoverIndex = -1;
+                       int annotationHoverIndex = -1;
+                       for (int i = 0; i < length; i++) {
+                               if (!fJavaEditorTextHoverDescriptors[i].getId().startsWith(
+                                               PLUGIN_ID)) {
+                                       if (problemHoverIndex == -1 || annotationHoverIndex == -1)
+                                               continue;
+                                       else {
+                                               last = i - 1;
+                                               break;
+                                       }
+                               }
+                               if (first == -1)
+                                       first = i;
+
+                               if (fJavaEditorTextHoverDescriptors[i].getId().equals(
+                                               "net.sourceforge.phpdt.ui.AnnotationHover")) { //$NON-NLS-1$
+                                       annotationHoverIndex = i;
+                                       continue;
+                               }
+                               if (fJavaEditorTextHoverDescriptors[i].getId().equals(
+                                               "net.sourceforge.phpdt.ui.ProblemHover")) { //$NON-NLS-1$
+                                       problemHoverIndex = i;
+                                       continue;
+                               }
+                       }
+
+                       JavaEditorTextHoverDescriptor hoverDescriptor = null;
+
+                       if (first > -1 && problemHoverIndex > -1
+                                       && problemHoverIndex != first) {
+                               // move problem hover to beginning
+                               hoverDescriptor = fJavaEditorTextHoverDescriptors[first];
+                               fJavaEditorTextHoverDescriptors[first] = fJavaEditorTextHoverDescriptors[problemHoverIndex];
+                               fJavaEditorTextHoverDescriptors[problemHoverIndex] = hoverDescriptor;
+
+                               // update annotation hover index if needed
+                               if (annotationHoverIndex == first)
+                                       annotationHoverIndex = problemHoverIndex;
+                       }
+
+                       if (annotationHoverIndex > -1 && annotationHoverIndex != last) {
+                               // move annotation hover to end
+                               hoverDescriptor = fJavaEditorTextHoverDescriptors[last];
+                               fJavaEditorTextHoverDescriptors[last] = fJavaEditorTextHoverDescriptors[annotationHoverIndex];
+                               fJavaEditorTextHoverDescriptors[annotationHoverIndex] = hoverDescriptor;
+                       }
+
+                       // Move Best Match hover to front
+                       for (int i = 0; i < fJavaEditorTextHoverDescriptors.length - 1; i++) {
+                               if (PreferenceConstants.ID_BESTMATCH_HOVER
+                                               .equals(fJavaEditorTextHoverDescriptors[i].getId())) {
+                                       hoverDescriptor = fJavaEditorTextHoverDescriptors[i];
+                                       for (int j = i; j > 0; j--)
+                                               fJavaEditorTextHoverDescriptors[j] = fJavaEditorTextHoverDescriptors[j - 1];
+                                       fJavaEditorTextHoverDescriptors[0] = hoverDescriptor;
+                                       break;
+                               }
+
+                       }
+               }
+
+               return fJavaEditorTextHoverDescriptors;
+       }
+
+       /**
+        * Resets the Java editor text hovers contributed to the workbench.
+        * <p>
+        * This will force a rebuild of the descriptors the next time a client asks
+        * for them.
+        * </p>
+        * 
+        * @return an array of JavaEditorTextHoverDescriptor
+        * @since 2.1
+        */
+       public void resetJavaEditorTextHoverDescriptors() {
+               fJavaEditorTextHoverDescriptors = null;
+       }
+
+       /**
+        * Creates the PHP plugin standard groups in a context menu.
+        */
+       public static void createStandardGroups(IMenuManager menu) {
+               if (!menu.isEmpty())
+                       return;
+               menu.add(new Separator(IContextMenuConstants.GROUP_NEW));
+               menu.add(new GroupMarker(IContextMenuConstants.GROUP_GOTO));
+               menu.add(new Separator(IContextMenuConstants.GROUP_OPEN));
+               menu.add(new GroupMarker(IContextMenuConstants.GROUP_SHOW));
+               menu.add(new Separator(IContextMenuConstants.GROUP_REORGANIZE));
+               menu.add(new Separator(IContextMenuConstants.GROUP_GENERATE));
+               menu.add(new Separator(IContextMenuConstants.GROUP_SEARCH));
+               menu.add(new Separator(IContextMenuConstants.GROUP_BUILD));
+               menu.add(new Separator(IContextMenuConstants.GROUP_ADDITIONS));
+               menu.add(new Separator(IContextMenuConstants.GROUP_VIEWER_SETUP));
+               menu.add(new Separator(IContextMenuConstants.GROUP_PROPERTIES));
+       }
+
+       public static IWorkbenchPage getActivePage() {
+               return getDefault().internalGetActivePage();
+       }
+
+       public static Shell getActiveWorkbenchShell() {
+               return getActiveWorkbenchWindow().getShell();
+       }
+
+       /**
+        * Returns an array of all editors that have an unsaved content. If the
+        * identical content is presented in more than one editor, only one of those
+        * editor parts is part of the result.
+        * 
+        * @return an array of all dirty editor parts.
+        */
+       public static IEditorPart[] getDirtyEditors() {
+               Set inputs = new HashSet();
+               List result = new ArrayList(0);
+               IWorkbench workbench = getDefault().getWorkbench();
+               IWorkbenchWindow[] windows = workbench.getWorkbenchWindows();
+               for (int i = 0; i < windows.length; i++) {
+                       IWorkbenchPage[] pages = windows[i].getPages();
+                       for (int x = 0; x < pages.length; x++) {
+                               IEditorPart[] editors = pages[x].getDirtyEditors();
+                               for (int z = 0; z < editors.length; z++) {
+                                       IEditorPart ep = editors[z];
+                                       IEditorInput input = ep.getEditorInput();
+                                       if (!inputs.contains(input)) {
+                                               inputs.add(input);
+                                               result.add(ep);
+                                       }
+                               }
+                       }
+               }
+               return (IEditorPart[]) result.toArray(new IEditorPart[result.size()]);
+       }
+
+       public static IWorkbenchWindow getActiveWorkbenchWindow() {
+               return getDefault().getWorkbench().getActiveWorkbenchWindow();
+       }
+
+       /**
+        * Returns the shared instance.
+        */
+       public static PHPeclipsePlugin getDefault() {
+               return plugin;
+       }
+
+       public static ImageDescriptorRegistry getImageDescriptorRegistry() {
+               return getDefault().internalGetImageDescriptorRegistry();
+       }
+
+       static IPath getInstallLocation() {
+               return new Path(getDefault().getBundle().getEntry("/").getFile());
+       }
+
+       // public static int getJVM() {
+       // return jvm;
+       // }
+
+       public static String getPluginId() {
+               return getDefault().getBundle().getSymbolicName();
+       }
+
+       /**
+        * Returns the standard display to be used. The method first checks, if the
+        * thread calling this method has an associated display. If so, this display
+        * is returned. Otherwise the method returns the default display.
+        */
+       public static Display getStandardDisplay() {
+               Display display = Display.getCurrent();
+               if (display == null) {
+                       display = Display.getDefault();
+               }
+               return display;
+       }
+
+       // public static ExternalToolsPlugin getExternalTools() {
+       // return externalTools;
+       // }
+       /**
+        * Returns the workspace instance.
+        */
+       public static IWorkspace getWorkspace() {
+               return ResourcesPlugin.getWorkspace();
+       }
+
+       public static boolean isDebug() {
+               return getDefault().isDebugging();
+       }
+
+       // public static void logErrorMessage(String message) {
+       // log(new Status(IStatus.ERROR, getPluginId(),
+       // JavaStatusConstants.INTERNAL_ERROR, message, null));
+       // }
+       //
+       // public static void logErrorStatus(String message, IStatus status) {
+       // if (status == null) {
+       // logErrorMessage(message);
+       // return;
+       // }
+       // MultiStatus multi= new MultiStatus(getPluginId(),
+       // JavaStatusConstants.INTERNAL_ERROR, message, null);
+       // multi.add(status);
+       // log(multi);
+       // }
+       //
+       // public static void log(Throwable e) {
+       // log(new Status(IStatus.ERROR, getPluginId(),
+       // JavaStatusConstants.INTERNAL_ERROR,
+       // JavaUIMessages.getString("JavaPlugin.internal_error"), e)); //$NON-NLS-1$
+       // }
+       public static void log(int severity, String message) {
+               Status status = new Status(severity, PLUGIN_ID, IStatus.OK, message,
+                               null);
+               log(status);
+       }
+
+       public static void log(IStatus status) {
+               getDefault().getLog().log(status);
+       }
+
+       public static void log(Throwable t) {
+               log(error(t));
+       }
+
+       public static void log(String message, Throwable t) {
+               log(error(message, t));
+       }
+
+       public static void logErrorMessage(String message) {
+               log(new Status(IStatus.ERROR, getPluginId(),
+                               IJavaStatusConstants.INTERNAL_ERROR, message, null));
+       }
+
+       public static IStatus error(Throwable t) {
+               return error("PHPeclipsePlugin.internalErrorOccurred", t); //$NON-NLS-1$
+       }
+
+       public static IStatus error(String message, Throwable t) {
+               return new Status(IStatus.ERROR, PLUGIN_ID, IStatus.ERROR, message, t);
+       }
+
+       // private static void setJVM() {
+       // String osName = System.getProperty("os.name");
+       // if (osName.startsWith("Mac OS")) {
+       // String mrjVersion = System.getProperty("mrj.version");
+       // String majorMRJVersion = mrjVersion.substring(0, 3);
+       // jvm = OTHER;
+       // try {
+       // double version = Double.valueOf(majorMRJVersion).doubleValue();
+       // if (version == 2) {
+       // jvm = MRJ_2_0;
+       // } else if (version >= 2.1 && version < 3) {
+       // jvm = MRJ_2_1;
+       // } else if (version == 3.0) {
+       // jvm = MRJ_3_0;
+       // } else if (version >= 3.1) {
+       // jvm = MRJ_3_1;
+       // }
+       // } catch (NumberFormatException nfe) {
+       // }
+       // } else if (osName.startsWith("Windows")) {
+       // if (osName.indexOf("9") != -1) {
+       // jvm = WINDOWS_9x;
+       // } else {
+       // jvm = WINDOWS_NT;
+       // }
+       // }
+       // }
+
+       // TODO: refactor this into a better method name !
+       public synchronized ICompilationUnitDocumentProvider getCompilationUnitDocumentProvider() {
+               if (fCompilationUnitDocumentProvider == null)
+                       fCompilationUnitDocumentProvider = new PHPDocumentProvider();
+               return fCompilationUnitDocumentProvider;
+       }
+
+       /**
+        * Get the identifier index manager for the given project
+        * 
+        * @param iProject
+        *            the current project
+        * @return
+        */
+       public IdentifierIndexManager getIndexManager(IProject iProject) {
+               IPath path = iProject.getWorkingLocation(PHPeclipsePlugin.PLUGIN_ID);
+               path = path.append("project.index");
+               String indexFilename = path.toString();
+               // try {
+               // IdentDB db = IdentDB.getInstance();
+               // } catch (ClassNotFoundException e) {
+               // e.printStackTrace();
+               // } catch (SQLException e) {
+               // e.printStackTrace();
+               // }
+               IdentifierIndexManager indexManager = (IdentifierIndexManager) fIndexManagerMap
+                               .get(indexFilename);
+               if (indexManager == null) {
+                       indexManager = new IdentifierIndexManager(indexFilename);
+                       fIndexManagerMap.put(indexFilename, indexManager);
+               }
+               return indexManager;
+       }
+
+       public synchronized IWorkingCopyManager getWorkingCopyManager() {
+               if (fWorkingCopyManager == null) {
+                       ICompilationUnitDocumentProvider provider = getCompilationUnitDocumentProvider();
+                       fWorkingCopyManager = new WorkingCopyManager(provider);
+               }
+               return fWorkingCopyManager;
+       }
+
+       public synchronized MembersOrderPreferenceCache getMemberOrderPreferenceCache() {
+               if (fMembersOrderPreferenceCache == null)
+                       fMembersOrderPreferenceCache = new MembersOrderPreferenceCache();
+               return fMembersOrderPreferenceCache;
+       }
+
+       /**
+        * Returns the mockup preference store for firing events and registering
+        * listeners on project setting changes. Temporary solution.
+        */
+       public MockupPreferenceStore getMockupPreferenceStore() {
+               if (fMockupPreferenceStore == null)
+                       fMockupPreferenceStore = new MockupPreferenceStore();
+
+               return fMockupPreferenceStore;
+       }
+
+       public synchronized ProblemMarkerManager getProblemMarkerManager() {
+               if (fProblemMarkerManager == null)
+                       fProblemMarkerManager = new ProblemMarkerManager();
+               return fProblemMarkerManager;
+       }
+
+       // public synchronized JavaTextTools getJavaTextTools() {
+       // if (fJavaTextTools == null)
+       // fJavaTextTools = new JavaTextTools(getPreferenceStore());
+       // return fJavaTextTools;
+       // }
+       public synchronized JavaTextTools getJavaTextTools() {
+               if (fJavaTextTools == null)
+                       fJavaTextTools = new JavaTextTools(getPreferenceStore(), JavaCore
+                                       .getPlugin().getPluginPreferences());
+               return fJavaTextTools;
+       }
+
+       public IFile getLastEditorFile() {
+               return fLastEditorFile;
+       }
+
+       /**
+        * Returns the string from the plugin's resource bundle, or 'key' if not
+        * found.
+        */
+       // public static String getResourceString(String key) {
+       // ResourceBundle bundle =
+       // PHPeclipsePlugin.getDefault().getResourceBundle();
+       // try {
+       // return bundle.getString(key);
+       // } catch (MissingResourceException e) {
+       // return key;
+       // }
+       // }
+       /**
+        * Returns the plugin's resource bundle,
+        */
+       // public ResourceBundle getResourceBundle() {
+       // return resourceBundle;
+       // }
+       protected void initializeDefaultPreferences(IPreferenceStore store) {
+               String operatingSystem = Platform.getOS();
+               // maxosx, linux, solaris, win32,...
+               try {
+                       InputStream is = getDefault()
+                                       .openStream(
+                                                       new Path("prefs/default_" + operatingSystem
+                                                                       + ".properties"));
+                       PropertyResourceBundle resourceBundle = new PropertyResourceBundle(
+                                       is);
+                       Enumeration e = resourceBundle.getKeys();
+                       String key;
+                       while (e.hasMoreElements()) {
+                               key = (String) e.nextElement();
+                               store.setDefault(key, resourceBundle.getString(key));
+                       }
+               } catch (Exception e) {
+                       // no default properties found
+                       if (operatingSystem.equals(Platform.OS_WIN32)) {
+                               // store.setDefault(PHP_RUN_PREF, "c:\\apache\\php\\php.exe");
+                               // store.setDefault(EXTERNAL_PARSER_PREF, "c:\\apache\\php\\php
+                               // -l -f {0}");
+                               // store.setDefault(MYSQL_RUN_PREF,
+                               // "c:\\apache\\mysql\\bin\\mysqld-nt.exe");
+                               // store.setDefault(APACHE_RUN_PREF, "c:\\apache\\apache.exe");
+                               // store.setDefault(XAMPP_START_PREF,
+                               // "c:\\xampp\\xampp_start.exe");
+                               // store.setDefault(XAMPP_STOP_PREF,
+                               // "c:\\xampp\\xampp_stop.exe");
+                               // store.setDefault(
+                               // ETC_HOSTS_PATH_PREF,
+                               // "c:\\windows\\system32\\drivers\\etc\\hosts");
+                       } else {
+                               // store.setDefault(PHP_RUN_PREF, "/apache/php/php");
+                               // store.setDefault(EXTERNAL_PARSER_PREF, "/apache/php/php -l -f
+                               // {0}");
+                               // store.setDefault(MYSQL_RUN_PREF, "/apache/mysql/bin/mysqld");
+                               // store.setDefault(APACHE_RUN_PREF, "/apache/apache");
+                               // store.setDefault(XAMPP_START_PREF, "xamp/xampp_start");
+                               // store.setDefault(XAMPP_STOP_PREF, "xampp/xampp_stop");
+                       }
+                       // store.setDefault(MYSQL_PREF, "--standalone");
+                       // store.setDefault(APACHE_START_PREF, "-c \"DocumentRoot
+                       // \"{0}\"\"");
+                       // store.setDefault(APACHE_STOP_PREF, "-k shutdown");
+                       // store.setDefault(APACHE_RESTART_PREF, "-k restart");
+                       // store.setDefault(MYSQL_START_BACKGROUND, "true");
+                       // store.setDefault(APACHE_START_BACKGROUND, "true");
+                       // store.setDefault(APACHE_STOP_BACKGROUND, "true");
+                       // store.setDefault(APACHE_RESTART_BACKGROUND, "true");
+               }
+
+               // php syntax highlighting
+               store.setDefault(PHP_USERDEF_XMLFILE, "");
+               PreferenceConverter.setDefault(store, PHP_TAG, PHPColorProvider.TAG);
+               PreferenceConverter.setDefault(store, PHP_KEYWORD,
+                               PHPColorProvider.KEYWORD);
+               PreferenceConverter.setDefault(store, PHP_VARIABLE,
+                               PHPColorProvider.VARIABLE);
+               PreferenceConverter.setDefault(store, PHP_VARIABLE_DOLLAR,
+                               PHPColorProvider.VARIABLE);
+               PreferenceConverter.setDefault(store, PHP_FUNCTIONNAME,
+                               PHPColorProvider.FUNCTION_NAME);
+               PreferenceConverter.setDefault(store, PHP_CONSTANT,
+                               PHPColorProvider.CONSTANT);
+               PreferenceConverter.setDefault(store, PHP_TYPE, PHPColorProvider.TYPE);
+               PreferenceConverter.setDefault(store, PHP_DEFAULT,
+                               PHPColorProvider.DEFAULT);
+               PreferenceConverter.setDefault(store, PHPDOC_KEYWORD,
+                               PHPColorProvider.PHPDOC_KEYWORD);
+               PreferenceConverter.setDefault(store, PHPDOC_TAG,
+                               PHPColorProvider.PHPDOC_TAG);
+               PreferenceConverter.setDefault(store, PHPDOC_LINK,
+                               PHPColorProvider.PHPDOC_LINK);
+               PreferenceConverter.setDefault(store, PHPDOC_DEFAULT,
+                               PHPColorProvider.PHPDOC_DEFAULT);
+
+               PreferenceConverter.setDefault(store, EDITOR_PHP_KEYWORD_RETURN_COLOR,
+                               new RGB(127, 0, 85));
+               store.setDefault(EDITOR_PHP_KEYWORD_RETURN_BOLD, true);
+               store.setDefault(EDITOR_PHP_KEYWORD_RETURN_ITALIC, false);
+
+               PreferenceConverter.setDefault(store, EDITOR_PHP_OPERATOR_COLOR,
+                               new RGB(0, 0, 0));
+               store.setDefault(EDITOR_PHP_OPERATOR_BOLD, false);
+               store.setDefault(EDITOR_PHP_OPERATOR_ITALIC, false);
+
+               PreferenceConverter.setDefault(store, EDITOR_PHP_BRACE_OPERATOR_COLOR,
+                               new RGB(0, 0, 0));
+               store.setDefault(EDITOR_PHP_BRACE_OPERATOR_BOLD, false);
+               store.setDefault(EDITOR_PHP_BRACE_OPERATOR_ITALIC, false);
+
+               // this will initialize the static fields in the syntaxrdr class
+               new PHPSyntaxRdr();
+               JavaCore.initializeDefaultPluginPreferences();
+               PreferenceConstants.initializeDefaultValues(store);
+               // externalTools.initializeDefaultPreferences(store);
+               // MarkerAnnotationPreferences.initializeDefaultValues(store);
+       }
+
+       private IWorkbenchPage internalGetActivePage() {
+               IWorkbenchWindow window = getWorkbench().getActiveWorkbenchWindow();
+               if (window != null)
+                       return window.getActivePage();
+               return null;
+       }
+
+       private ImageDescriptorRegistry internalGetImageDescriptorRegistry() {
+               if (fImageDescriptorRegistry == null)
+                       fImageDescriptorRegistry = new ImageDescriptorRegistry();
+               return fImageDescriptorRegistry;
+       }
+
+       /**
+        * Open a file in the Workbench that may or may not exist in the workspace.
+        * Must be run on the UI thread.
+        * 
+        * @param filename
+        * @throws CoreException
+        */
+       public ITextEditor openFileInTextEditor(String filename)
+                       throws CoreException {
+               // reject directories
+               if (new File(filename).isDirectory())
+                       return null;
+               IWorkbench workbench = PlatformUI.getWorkbench();
+               IWorkbenchWindow window = workbench.getWorkbenchWindows()[0];
+               IWorkbenchPage page = window.getActivePage();
+               IPath path = new Path(filename);
+               // If the file exists in the workspace, open it
+               IFile file = getWorkspace().getRoot().getFileForLocation(path);
+               IEditorPart editor;
+               ITextEditor textEditor;
+               if (file != null && file.exists()) {
+                       editor = IDE.openEditor(page, file, true);
+                       textEditor = (ITextEditor) editor.getAdapter(ITextEditor.class);
+               } else {
+                       // Otherwise open the stream directly
+                       if (page == null)
+                               return null;
+                       FileStorage storage = new FileStorage(path);
+                       IEditorRegistry registry = getWorkbench().getEditorRegistry();
+                       IEditorDescriptor desc = registry.getDefaultEditor(filename);
+                       if (desc == null) {
+                               desc = registry
+                                               .findEditor(IEditorRegistry.SYSTEM_EXTERNAL_EDITOR_ID);
+                               // desc = registry.getDefaultEditor();
+                       }
+                       IEditorInput input = new ExternalEditorInput(storage);
+                       editor = page.openEditor(input, desc.getId());
+                       textEditor = (ITextEditor) editor.getAdapter(ITextEditor.class);
+                       // If the storage provider is not ours, we can't guarantee
+                       // read/write.
+                       if (textEditor != null) {
+                               IDocumentProvider documentProvider = textEditor
+                                               .getDocumentProvider();
+                               if (!(documentProvider instanceof ExternalStorageDocumentProvider)) {
+                                       storage.setReadOnly();
+                               }
+                       }
+               }
+               return textEditor;
+       }
+
+       /**
+        * Open a file in the Workbench that may or may not exist in the workspace.
+        * Must be run on the UI thread.
+        * 
+        * @param filename
+        * @param line
+        * @throws CoreException
+        */
+       public void openFileAndGotoLine(String filename, int line)
+                       throws CoreException {
+               ITextEditor textEditor = openFileInTextEditor(filename);
+               if (textEditor != null) {
+                       // If a line number was given, go to it
+                       if (line > 0) {
+                               try {
+                                       line--; // document is 0 based
+                                       IDocument document = textEditor.getDocumentProvider()
+                                                       .getDocument(textEditor.getEditorInput());
+                                       textEditor.selectAndReveal(document.getLineOffset(line),
+                                                       document.getLineLength(line));
+                               } catch (BadLocationException e) {
+                                       // invalid text position -> do nothing
+                               }
+                       }
+               }
+       }
+
+       /**
+        * Open a file in the Workbench that may or may not exist in the workspace.
+        * Must be run on the UI thread.
+        * 
+        * @param filename
+        * @param offset
+        * @throws CoreException
+        */
+       public void openFileAndGotoOffset(String filename, int offset, int length)
+                       throws CoreException {
+               ITextEditor textEditor = openFileInTextEditor(filename);
+               if (textEditor != null) {
+                       // If a line number was given, go to it
+                       if (offset >= 0) {
+                               IDocument document = textEditor.getDocumentProvider()
+                                               .getDocument(textEditor.getEditorInput());
+                               textEditor.selectAndReveal(offset, length);
+                       }
+               }
+       }
+
+       public void openFileAndFindString(String filename, String findString)
+                       throws CoreException {
+               ITextEditor textEditor = openFileInTextEditor(filename);
+               if (textEditor != null) {
+                       // If a string was given, go to it
+                       if (findString != null) {
+                               try {
+                                       IDocument document = textEditor.getDocumentProvider()
+                                                       .getDocument(textEditor.getEditorInput());
+                                       int offset = document.search(0, findString, true, false,
+                                                       true);
+                                       textEditor.selectAndReveal(offset, findString.length());
+                               } catch (BadLocationException e) {
+                                       // invalid text position -> do nothing
+                               }
+                       }
+               }
+       }
+
+       public void setLastEditorFile(IFile textEditor) {
+               this.fLastEditorFile = textEditor;
+       }
+
+       /*
+        * @see org.eclipse.core.runtime.Plugin#stop
+        */
+       public void stop(BundleContext context) throws Exception {
+               try {
+                       // JavaCore.stop(this, context);
+                       plugin.savePluginPreferences();
+                       IWorkspace workspace = ResourcesPlugin.getWorkspace();
+                       workspace.removeResourceChangeListener(JavaModelManager
+                                       .getJavaModelManager().deltaState);
+                       workspace.removeSaveParticipant(plugin);
+
+                       JavaModelManager.getJavaModelManager().shutdown();
+
+                       // save the information from the php index files if necessary
+                       Collection collection = fIndexManagerMap.values();
+                       Iterator iterator = collection.iterator();
+                       IdentifierIndexManager indexManager = null;
+                       while (iterator.hasNext()) {
+                               indexManager = (IdentifierIndexManager) iterator.next();
+                               indexManager.writeFile();
+                       }
+                       if (fImageDescriptorRegistry != null)
+                               fImageDescriptorRegistry.dispose();
+
+                       // AllTypesCache.terminate();
+
+                       if (fImageDescriptorRegistry != null)
+                               fImageDescriptorRegistry.dispose();
+
+                       unregisterAdapters();
+
+                       // if (fASTProvider != null) {
+                       // fASTProvider.dispose();
+                       // fASTProvider= null;
+                       // }
+
+                       if (fWorkingCopyManager != null) {
+                               fWorkingCopyManager.shutdown();
+                               fWorkingCopyManager = null;
+                       }
+
+                       if (fCompilationUnitDocumentProvider != null) {
+                               fCompilationUnitDocumentProvider.shutdown();
+                               fCompilationUnitDocumentProvider = null;
+                       }
+
+                       if (fJavaTextTools != null) {
+                               fJavaTextTools.dispose();
+                               fJavaTextTools = null;
+                       }
+                       // JavaDocLocations.shutdownJavadocLocations();
+
+                       uninstallPreferenceStoreBackwardsCompatibility();
+
+                       // RefactoringCore.getUndoManager().shutdown();
+               } finally {
+                       super.stop(context);
+               }
+       }
+
+       /**
+        * Installs backwards compatibility for the preference store.
+        */
+       private void installPreferenceStoreBackwardsCompatibility() {
+
+               /*
+                * Installs backwards compatibility: propagate the Java editor font from
+                * a pre-2.1 plug-in to the Platform UI's preference store to preserve
+                * the Java editor font from a pre-2.1 workspace. This is done only
+                * once.
+                */
+               String fontPropagatedKey = "fontPropagated"; //$NON-NLS-1$
+               if (getPreferenceStore().contains(JFaceResources.TEXT_FONT)
+                               && !getPreferenceStore().isDefault(JFaceResources.TEXT_FONT)) {
+                       if (!getPreferenceStore().getBoolean(fontPropagatedKey))
+                               PreferenceConverter
+                                               .setValue(PlatformUI.getWorkbench()
+                                                               .getPreferenceStore(),
+                                                               PreferenceConstants.EDITOR_TEXT_FONT,
+                                                               PreferenceConverter.getFontDataArray(
+                                                                               getPreferenceStore(),
+                                                                               JFaceResources.TEXT_FONT));
+               }
+               getPreferenceStore().setValue(fontPropagatedKey, true);
+
+               /*
+                * Backwards compatibility: set the Java editor font in this plug-in's
+                * preference store to let older versions access it. Since 2.1 the Java
+                * editor font is managed by the workbench font preference page.
+                */
+               PreferenceConverter.putValue(getPreferenceStore(),
+                               JFaceResources.TEXT_FONT, JFaceResources.getFontRegistry()
+                                               .getFontData(PreferenceConstants.EDITOR_TEXT_FONT));
+
+               fFontPropertyChangeListener = new IPropertyChangeListener() {
+                       public void propertyChange(PropertyChangeEvent event) {
+                               if (PreferenceConstants.EDITOR_TEXT_FONT.equals(event
+                                               .getProperty()))
+                                       PreferenceConverter.putValue(getPreferenceStore(),
+                                                       JFaceResources.TEXT_FONT,
+                                                       JFaceResources.getFontRegistry().getFontData(
+                                                                       PreferenceConstants.EDITOR_TEXT_FONT));
+                       }
+               };
+               JFaceResources.getFontRegistry().addListener(
+                               fFontPropertyChangeListener);
+       }
+
+       /**
+        * Uninstalls backwards compatibility for the preference store.
+        */
+       private void uninstallPreferenceStoreBackwardsCompatibility() {
+               JFaceResources.getFontRegistry().removeListener(
+                               fFontPropertyChangeListener);
+               // getPreferenceStore().removePropertyChangeListener(fPropertyChangeListener);
+       }
+
+       /*
+        * (non - Javadoc) Method declared in Plugin
+        */
+       public void start(BundleContext context) throws Exception {
+               super.start(context);
+
+               // JavaCore.start(this, context);
+               final JavaModelManager modelManager = JavaModelManager
+                               .getJavaModelManager();
+               try {
+                       modelManager.configurePluginDebugOptions();
+
+                       // request state folder creation (workaround 19885)
+                       getStateLocation();
+                       // retrieve variable values
+                       PHPeclipsePlugin.getDefault().getPluginPreferences()
+                                       .addPropertyChangeListener(
+                                                       new JavaModelManager.PluginPreferencesListener());
+                       // manager.loadVariablesAndContainers();
+
+                       final IWorkspace workspace = ResourcesPlugin.getWorkspace();
+                       workspace.addResourceChangeListener(modelManager.deltaState,
+                                       IResourceChangeEvent.PRE_BUILD
+                                                       | IResourceChangeEvent.POST_BUILD
+                                                       | IResourceChangeEvent.POST_CHANGE
+                                                       | IResourceChangeEvent.PRE_DELETE
+                                                       | IResourceChangeEvent.PRE_CLOSE);
+
+                       ISavedState savedState = workspace.addSaveParticipant(
+                                       PHPeclipsePlugin.this, modelManager);
+
+                       // process deltas since last activated in indexer thread so that
+                       // indexes are up-to-date.
+                       // see https://bugs.eclipse.org/bugs/show_bug.cgi?id=38658
+// This causes timeout at EclipseLazyStarter
+//                     Job processSavedState = new Job(Util.bind("savedState.jobName")) { //$NON-NLS-1$
+//                             protected IStatus run(IProgressMonitor monitor) {
+//                                     try {
+//                                             // add save participant and process delta atomically
+//                                             // see
+//                                             // https://bugs.eclipse.org/bugs/show_bug.cgi?id=59937
+//                                             workspace.run(new IWorkspaceRunnable() {
+//                                                     public void run(IProgressMonitor progress)
+//                                                                     throws CoreException {
+//                                                             ISavedState savedState = workspace
+//                                                                             .addSaveParticipant(
+//                                                                                             PHPeclipsePlugin.this,
+//                                                                                             modelManager);
 //                                                             if (savedState != null) {
-//                                                                     // the event type coming from the saved state is always POST_AUTO_BUILD
-//                                                                     // force it to be POST_CHANGE so that the delta processor can handle it
-//                                                                     manager.deltaState.getDeltaProcessor().overridenEventType = IResourceChangeEvent.POST_CHANGE;
-//                                                                     savedState.processResourceChangeEvents(manager.deltaState);
+//                                                                     // the event type coming from the saved
+//                                                                     // state is always POST_AUTO_BUILD
+//                                                                     // force it to be POST_CHANGE so that the
+//                                                                     // delta processor can handle it
+//                                                                     modelManager.deltaState.getDeltaProcessor().overridenEventType = IResourceChangeEvent.POST_CHANGE;
+//                                                                     savedState
+//                                                                                     .processResourceChangeEvents(modelManager.deltaState);
 //                                                             }
 //                                                     }
-//                                             },
-//                                             monitor);
-//                             } catch (CoreException e) {
-//                                     return e.getStatus();
+//                                             }, monitor);
+//                                     } catch (CoreException e) {
+//                                             return e.getStatus();
+//                                     }
+//                                     return Status.OK_STATUS;
 //                             }
-//                             return Status.OK_STATUS;
-//                     }
-//             };
-//             processSavedState.setSystem(true);
-//             processSavedState.setPriority(Job.SHORT); // process asap
-//             processSavedState.schedule();
-    } catch (RuntimeException e) {
-      manager.shutdown();
-      throw e;
-    }
-
-    registerAdapters();
-
-    // if (USE_WORKING_COPY_OWNERS) {
-    WorkingCopyOwner.setPrimaryBufferProvider(new WorkingCopyOwner() {
-      public IBuffer createBuffer(ICompilationUnit workingCopy) {
-        ICompilationUnit original = workingCopy.getPrimary();
-        IResource resource = original.getResource();
-        if (resource instanceof IFile)
-          return new DocumentAdapter(workingCopy, (IFile) resource);
-        return DocumentAdapter.NULL;
-      }
-    });
-    // }
-
-    installPreferenceStoreBackwardsCompatibility();
-
-  }
-
-  //    registerAdapters();
-  //
-  //     // externalTools.startUp();
-  //    getStandardDisplay().asyncExec(new Runnable() {
-  //      public void run() {
-  //        //initialize the variable context manager
-  //        VariableContextManager.getDefault();
-  //      }
-  //    });
-  //
-  //    // if (USE_WORKING_COPY_OWNERS) {
-  //    WorkingCopyOwner.setPrimaryBufferProvider(new WorkingCopyOwner() {
-  //      public IBuffer createBuffer(ICompilationUnit workingCopy) {
-  //        ICompilationUnit original = workingCopy.getPrimary();
-  //        IResource resource = original.getResource();
-  //        if (resource instanceof IFile)
-  //          return new DocumentAdapter(workingCopy, (IFile) resource);
-  //        return DocumentAdapter.NULL;
-  //      }
-  //    });
-  //    // }
-
-  //    installPreferenceStoreBackwardsCompatibility();
-
-  //           AllTypesCache.initialize();
-
-  // Initialize AST provider
-  //           getASTProvider();
-  //  }
-
-  //  public void startup() throws CoreException {
-  //    super.startup();
-  //    // begin JavaCore.startup();
-  //    JavaModelManager manager = JavaModelManager.getJavaModelManager();
-  //    try {
-  //      manager.configurePluginDebugOptions();
-  //      // request state folder creation (workaround 19885)
-  //      // JavaCore.getPlugin().getStateLocation();
-  //      getStateLocation();
-  //      // retrieve variable values
-  //      //
-  // JavaCore.getPlugin().getPluginPreferences().addPropertyChangeListener(new
-  //      // JavaModelManager.PluginPreferencesListener());
-  //      getPluginPreferences().addPropertyChangeListener(
-  //          new JavaModelManager.PluginPreferencesListener());
-  //      // TODO khartlage temp-del
-  //      // manager.loadVariablesAndContainers();
-  //      final IWorkspace workspace = ResourcesPlugin.getWorkspace();
-  //           workspace.addResourceChangeListener(
-  //                   manager.deltaState,
-  //                   IResourceChangeEvent.PRE_BUILD
-  //                           | IResourceChangeEvent.POST_BUILD
-  //                           | IResourceChangeEvent.POST_CHANGE
-  //                           | IResourceChangeEvent.PRE_DELETE
-  //                           | IResourceChangeEvent.PRE_CLOSE);
-  //      // startIndexing();
-  //      workspace.addSaveParticipant(PHPeclipsePlugin.getDefault(), manager);
-  //    } catch (CoreException e) {
-  //    } catch (RuntimeException e) {
-  //      manager.shutdown();
-  //      throw e;
-  //    }
-  //    // end JavaCore.startup();
-  //    IAdapterManager platformManager = Platform.getAdapterManager();
-  //    platformManager.registerAdapters(new PHPElementAdapterFactory(),
-  //        PHPElement.class);
-  //    platformManager.registerAdapters(new ResourceAdapterFactory(),
-  //        IResource.class);
-  //    // externalTools.startUp();
-  //    getStandardDisplay().asyncExec(new Runnable() {
-  //      public void run() {
-  //        //initialize the variable context manager
-  //        VariableContextManager.getDefault();
-  //      }
-  //    });
-  //  }
-
-  private void registerAdapters() {
-    fJavaElementAdapterFactory = new JavaElementAdapterFactory();
-    //         fMarkerAdapterFactory= new MarkerAdapterFactory();
-    //         fEditorInputAdapterFactory= new EditorInputAdapterFactory();
-    fResourceAdapterFactory = new ResourceAdapterFactory();
-    //         fLogicalPackageAdapterFactory= new LogicalPackageAdapterFactory();
-
-    IAdapterManager manager = Platform.getAdapterManager();
-    manager.registerAdapters(fJavaElementAdapterFactory, IJavaElement.class);
-    //         manager.registerAdapters(fMarkerAdapterFactory, IMarker.class);
-    //         manager.registerAdapters(fEditorInputAdapterFactory, IEditorInput.class);
-    manager.registerAdapters(fResourceAdapterFactory, IResource.class);
-    //         manager.registerAdapters(fLogicalPackageAdapterFactory,
-    // LogicalPackage.class);
-  }
-
-  private void unregisterAdapters() {
-    IAdapterManager manager = Platform.getAdapterManager();
-    manager.unregisterAdapters(fJavaElementAdapterFactory);
-    //         manager.unregisterAdapters(fMarkerAdapterFactory);
-    //         manager.unregisterAdapters(fEditorInputAdapterFactory);
-    manager.unregisterAdapters(fResourceAdapterFactory);
-    //         manager.unregisterAdapters(fLogicalPackageAdapterFactory);
-  }
-
-  /**
-   * Returns a combined preference store, this store is read-only.
-   * 
-   * @return the combined preference store
-   * 
-   * @since 3.0
-   */
-  public IPreferenceStore getCombinedPreferenceStore() {
-    if (fCombinedPreferenceStore == null) {
-      IPreferenceStore generalTextStore = EditorsUI.getPreferenceStore();
-      fCombinedPreferenceStore = new ChainedPreferenceStore(
-          new IPreferenceStore[] {
-              getPreferenceStore(),
-              new PreferencesAdapter(PHPeclipsePlugin.getDefault()
-                  .getPluginPreferences()), generalTextStore });
-    }
-    return fCombinedPreferenceStore;
-  }
-
-  public synchronized IBufferFactory getBufferFactory() {
-    if (fBufferFactory == null)
-      fBufferFactory = new CustomBufferFactory();
-    return fBufferFactory;
-  }
-
-  /**
-   * Returns the registry of the extensions to the
-   * <code>net.sourceforge.phpdt.ui.javaFoldingStructureProvider</code> extension
-   * point.
-   * 
-   * @return the registry of contributed
-   *         <code>IJavaFoldingStructureProvider</code>
-   * @since 3.0
-   */
-  public synchronized JavaFoldingStructureProviderRegistry getFoldingStructureProviderRegistry() {
-    if (fFoldingStructureProviderRegistry == null)
-      fFoldingStructureProviderRegistry = new JavaFoldingStructureProviderRegistry();
-    return fFoldingStructureProviderRegistry;
-  }
-
-  /**
-   * Runs the given action as an atomic Java model operation.
-   * <p>
-   * After running a method that modifies java elements, registered listeners
-   * receive after-the-fact notification of what just transpired, in the form of
-   * a element changed event. This method allows clients to call a number of
-   * methods that modify java elements and only have element changed event
-   * notifications reported at the end of the entire batch.
-   * </p>
-   * <p>
-   * If this method is called outside the dynamic scope of another such call,
-   * this method runs the action and then reports a single element changed event
-   * describing the net effect of all changes done to java elements by the
-   * action.
-   * </p>
-   * <p>
-   * If this method is called in the dynamic scope of another such call, this
-   * method simply runs the action.
-   * </p>
-   * 
-   * @param action
-   *          the action to perform
-   * @param monitor
-   *          a progress monitor, or <code>null</code> if progress reporting
-   *          and cancellation are not desired
-   * @exception CoreException
-   *              if the operation failed.
-   * @since 2.1
-   */
-  public static void run(IWorkspaceRunnable action, IProgressMonitor monitor)
-      throws CoreException {
-    run(action, ResourcesPlugin.getWorkspace().getRoot(), monitor);
-  }
-
-  /**
-   * Runs the given action as an atomic Java model operation.
-   * <p>
-   * After running a method that modifies java elements, registered listeners
-   * receive after-the-fact notification of what just transpired, in the form of
-   * a element changed event. This method allows clients to call a number of
-   * methods that modify java elements and only have element changed event
-   * notifications reported at the end of the entire batch.
-   * </p>
-   * <p>
-   * If this method is called outside the dynamic scope of another such call,
-   * this method runs the action and then reports a single element changed event
-   * describing the net effect of all changes done to java elements by the
-   * action.
-   * </p>
-   * <p>
-   * If this method is called in the dynamic scope of another such call, this
-   * method simply runs the action.
-   * </p>
-   * <p>
-   * The supplied scheduling rule is used to determine whether this operation
-   * can be run simultaneously with workspace changes in other threads. See
-   * <code>IWorkspace.run(...)</code> for more details.
-   * </p>
-   * 
-   * @param action
-   *          the action to perform
-   * @param rule
-   *          the scheduling rule to use when running this operation, or
-   *          <code>null</code> if there are no scheduling restrictions for
-   *          this operation.
-   * @param monitor
-   *          a progress monitor, or <code>null</code> if progress reporting
-   *          and cancellation are not desired
-   * @exception CoreException
-   *              if the operation failed.
-   * @since 3.0
-   */
-  public static void run(IWorkspaceRunnable action, ISchedulingRule rule,
-      IProgressMonitor monitor) throws CoreException {
-    IWorkspace workspace = ResourcesPlugin.getWorkspace();
-    if (workspace.isTreeLocked()) {
-      new BatchOperation(action).run(monitor);
-    } else {
-      // use IWorkspace.run(...) to ensure that a build will be done in
-      // autobuild mode
-      workspace.run(new BatchOperation(action), rule, IWorkspace.AVOID_UPDATE,
-          monitor);
-    }
-  }
-  
-  /**
+//                     };
+// Replace Job + IWorkspace.run() to WorkspaceJob
+                       WorkspaceJob processSavedState = new WorkspaceJob(
+                                       Util.bind("savedState.jobName")) { //$NON-NLS-1$
+                               public IStatus runInWorkspace(IProgressMonitor monitor)
+                                               throws CoreException {
+                                       ISavedState savedState = workspace.addSaveParticipant(
+                                                       PHPeclipsePlugin.this, modelManager);
+                                       if (savedState != null) {
+                                               modelManager.deltaState.getDeltaProcessor().overridenEventType
+                                                               = IResourceChangeEvent.POST_CHANGE;
+                                               savedState.processResourceChangeEvents(modelManager.deltaState);
+                                       }
+                                       return Status.OK_STATUS;
+                               }
+                       };
+                       processSavedState.setSystem(true);
+                       processSavedState.setPriority(Job.SHORT); // process asap
+                       processSavedState.schedule();
+               } catch (RuntimeException e) {
+                       modelManager.shutdown();
+                       throw e;
+               }
+
+               registerAdapters();
+
+               // if (USE_WORKING_COPY_OWNERS) {
+               WorkingCopyOwner.setPrimaryBufferProvider(new WorkingCopyOwner() {
+                       public IBuffer createBuffer(ICompilationUnit workingCopy) {
+                               ICompilationUnit original = workingCopy.getPrimary();
+                               IResource resource = original.getResource();
+                               if (resource instanceof IFile)
+                                       return new DocumentAdapter(workingCopy, (IFile) resource);
+                               return DocumentAdapter.NULL;
+                       }
+               });
+               // }
+
+               installPreferenceStoreBackwardsCompatibility();
+
+       }
+
+       private void registerAdapters() {
+               fJavaElementAdapterFactory = new JavaElementAdapterFactory();
+               fResourceAdapterFactory = new ResourceAdapterFactory();
+
+               IAdapterManager manager = Platform.getAdapterManager();
+               manager
+                               .registerAdapters(fJavaElementAdapterFactory,
+                                               IJavaElement.class);
+               manager.registerAdapters(fResourceAdapterFactory, IResource.class);
+       }
+
+       private void unregisterAdapters() {
+               IAdapterManager manager = Platform.getAdapterManager();
+               manager.unregisterAdapters(fJavaElementAdapterFactory);
+               manager.unregisterAdapters(fResourceAdapterFactory);
+       }
+
+       /**
+        * Returns a combined preference store, this store is read-only.
+        * 
+        * @return the combined preference store
+        * 
+        * @since 3.0
+        */
+       public IPreferenceStore getCombinedPreferenceStore() {
+               if (fCombinedPreferenceStore == null) {
+                       IPreferenceStore generalTextStore = EditorsUI.getPreferenceStore();
+                       fCombinedPreferenceStore = new ChainedPreferenceStore(
+                                       new IPreferenceStore[] {
+                                                       getPreferenceStore(),
+                                                       new PreferencesAdapter(PHPeclipsePlugin
+                                                                       .getDefault().getPluginPreferences()),
+                                                       generalTextStore });
+               }
+               return fCombinedPreferenceStore;
+       }
+
+       public synchronized IBufferFactory getBufferFactory() {
+               if (fBufferFactory == null)
+                       fBufferFactory = new CustomBufferFactory();
+               return fBufferFactory;
+       }
+
+       /**
+        * Returns the registry of the extensions to the
+        * <code>net.sourceforge.phpdt.ui.javaFoldingStructureProvider</code>
+        * extension point.
+        * 
+        * @return the registry of contributed
+        *         <code>IJavaFoldingStructureProvider</code>
+        * @since 3.0
+        */
+       public synchronized JavaFoldingStructureProviderRegistry getFoldingStructureProviderRegistry() {
+               if (fFoldingStructureProviderRegistry == null)
+                       fFoldingStructureProviderRegistry = new JavaFoldingStructureProviderRegistry();
+               return fFoldingStructureProviderRegistry;
+       }
+
+       /**
+        * Runs the given action as an atomic Java model operation.
+        * <p>
+        * After running a method that modifies java elements, registered listeners
+        * receive after-the-fact notification of what just transpired, in the form
+        * of a element changed event. This method allows clients to call a number
+        * of methods that modify java elements and only have element changed event
+        * notifications reported at the end of the entire batch.
+        * </p>
+        * <p>
+        * If this method is called outside the dynamic scope of another such call,
+        * this method runs the action and then reports a single element changed
+        * event describing the net effect of all changes done to java elements by
+        * the action.
+        * </p>
+        * <p>
+        * If this method is called in the dynamic scope of another such call, this
+        * method simply runs the action.
+        * </p>
+        * 
+        * @param action
+        *            the action to perform
+        * @param monitor
+        *            a progress monitor, or <code>null</code> if progress
+        *            reporting and cancellation are not desired
+        * @exception CoreException
+        *                if the operation failed.
+        * @since 2.1
+        */
+       public static void run(IWorkspaceRunnable action, IProgressMonitor monitor)
+                       throws CoreException {
+               run(action, ResourcesPlugin.getWorkspace().getRoot(), monitor);
+       }
+
+       /**
+        * Runs the given action as an atomic Java model operation.
+        * <p>
+        * After running a method that modifies java elements, registered listeners
+        * receive after-the-fact notification of what just transpired, in the form
+        * of a element changed event. This method allows clients to call a number
+        * of methods that modify java elements and only have element changed event
+        * notifications reported at the end of the entire batch.
+        * </p>
+        * <p>
+        * If this method is called outside the dynamic scope of another such call,
+        * this method runs the action and then reports a single element changed
+        * event describing the net effect of all changes done to java elements by
+        * the action.
+        * </p>
+        * <p>
+        * If this method is called in the dynamic scope of another such call, this
+        * method simply runs the action.
+        * </p>
+        * <p>
+        * The supplied scheduling rule is used to determine whether this operation
+        * can be run simultaneously with workspace changes in other threads. See
+        * <code>IWorkspace.run(...)</code> for more details.
+        * </p>
+        * 
+        * @param action
+        *            the action to perform
+        * @param rule
+        *            the scheduling rule to use when running this operation, or
+        *            <code>null</code> if there are no scheduling restrictions
+        *            for this operation.
+        * @param monitor
+        *            a progress monitor, or <code>null</code> if progress
+        *            reporting and cancellation are not desired
+        * @exception CoreException
+        *                if the operation failed.
+        * @since 3.0
+        */
+       public static void run(IWorkspaceRunnable action, ISchedulingRule rule,
+                       IProgressMonitor monitor) throws CoreException {
+               IWorkspace workspace = ResourcesPlugin.getWorkspace();
+               if (workspace.isTreeLocked()) {
+                       new BatchOperation(action).run(monitor);
+               } else {
+                       // use IWorkspace.run(...) to ensure that a build will be done in
+                       // autobuild mode
+                       workspace.run(new BatchOperation(action), rule,
+                                       IWorkspace.AVOID_UPDATE, monitor);
+               }
+       }
+
+       /**
         * Returns the template context type registry for the java plugin.
         * 
         * @return the template context type registry for the java plugin
@@ -1483,8 +1307,8 @@ public class PHPeclipsePlugin extends AbstractUIPlugin implements
         */
        public ContextTypeRegistry getTemplateContextRegistry() {
                if (fContextTypeRegistry == null) {
-                       fContextTypeRegistry= new ContributionContextTypeRegistry();
-                       
+                       fContextTypeRegistry = new ContributionContextTypeRegistry();
+
                        fContextTypeRegistry.addContextType(new JavaContextType());
                        fContextTypeRegistry.addContextType(new JavaDocContextType());
                        fContextTypeRegistry.addContextType(new HTMLContextType());
@@ -1492,7 +1316,7 @@ public class PHPeclipsePlugin extends AbstractUIPlugin implements
 
                return fContextTypeRegistry;
        }
-       
+
        /**
         * Returns the template store for the java editor templates.
         * 
@@ -1501,21 +1325,16 @@ public class PHPeclipsePlugin extends AbstractUIPlugin implements
         */
        public TemplateStore getTemplateStore() {
                if (fTemplateStore == null) {
-//                     boolean alreadyMigrated= getPreferenceStore().getBoolean(TEMPLATES_MIGRATION_KEY);
-//                     if (alreadyMigrated)
-                               fTemplateStore= new ContributionTemplateStore(getTemplateContextRegistry(), getPreferenceStore(), TEMPLATES_KEY);
-//                     else {
-//                             fTemplateStore= new CompatibilityTemplateStore(getTemplateContextRegistry(), getPreferenceStore(), TEMPLATES_KEY, Templates.getInstance());
-//                             getPreferenceStore().setValue(TEMPLATES_MIGRATION_KEY, true);
-//                     }
-
+                       fTemplateStore = new ContributionTemplateStore(
+                                       getTemplateContextRegistry(), getPreferenceStore(),
+                                       TEMPLATES_KEY);
                        try {
                                fTemplateStore.load();
                        } catch (IOException e) {
                                log(e);
                        }
                }
-               
+
                return fTemplateStore;
        }
 
@@ -1529,14 +1348,15 @@ public class PHPeclipsePlugin extends AbstractUIPlugin implements
         */
        public ContextTypeRegistry getCodeTemplateContextRegistry() {
                if (fCodeTemplateContextTypeRegistry == null) {
-                       fCodeTemplateContextTypeRegistry= new ContributionContextTypeRegistry();
-                       
-                       CodeTemplateContextType.registerContextTypes(fCodeTemplateContextTypeRegistry);
+                       fCodeTemplateContextTypeRegistry = new ContributionContextTypeRegistry();
+
+                       CodeTemplateContextType
+                                       .registerContextTypes(fCodeTemplateContextTypeRegistry);
                }
 
                return fCodeTemplateContextTypeRegistry;
        }
-       
+
        /**
         * Returns the template store for the code generation templates.
         * 
@@ -1545,25 +1365,16 @@ public class PHPeclipsePlugin extends AbstractUIPlugin implements
         */
        public TemplateStore getCodeTemplateStore() {
                if (fCodeTemplateStore == null) {
-//                     boolean alreadyMigrated= getPreferenceStore().getBoolean(CODE_TEMPLATES_MIGRATION_KEY);
-//                     if (alreadyMigrated)
-                               fCodeTemplateStore= new ContributionTemplateStore(getCodeTemplateContextRegistry(), getPreferenceStore(), CODE_TEMPLATES_KEY);
-//                     else {
-//                             fCodeTemplateStore= new CompatibilityTemplateStore(getCodeTemplateContextRegistry(), getPreferenceStore(), CODE_TEMPLATES_KEY, CodeTemplates.getInstance());
-//                             getPreferenceStore().setValue(CODE_TEMPLATES_MIGRATION_KEY, true);
-//                     }
-
+                       fCodeTemplateStore = new ContributionTemplateStore(
+                                       getCodeTemplateContextRegistry(), getPreferenceStore(),
+                                       CODE_TEMPLATES_KEY);
                        try {
                                fCodeTemplateStore.load();
                        } catch (IOException e) {
                                log(e);
                        }
-                       
-                       // compatibility / bug fixing code for duplicated templates
-                       // TODO remove for 3.0
-//                     CompatibilityTemplateStore.pruneDuplicates(fCodeTemplateStore, true);
                }
-               
+
                return fCodeTemplateStore;
        }
 }
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